SRR10294592 (PRJNA577942)

Processing Status: Completed

General Details

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Sample Name GSM4125802
Organism Haloferax volcanii DS2
Release Date 4/2020

Sample Links

Run Details

Spots 24325319
Total Bases 1629796373
Total Bases 1629796373

Repository Details

SRA SRR10294592
ENA SRR10294592
BioProject PRJNA577942

Experiment Details

Title Replicate 1 centrifugation harvesting ribosome profiling

Sample Details

Run Accession SRR10294592
Total Number Of Spots (Original File)) 24325319
Total Number Of Bases (Original File) 1629796373
Average Read Length 67
Original File Size (Mb) 736
Experiment Id SRX7007420
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP225954
Pubmed Id 32382758
Sample SRS5528590
Biosample SAMN13041939
Sample Type simple
Organism Taxid 309800
Organism Haloferax volcanii DS2
Sample Name GSM4125802
Center Name GEO
Submission SRA980319
Month 4
Year 2020
Author Gelsinger
Sample Source Cellular culture
Sample Title Replicate 1 centrifugation harvesting ribosome profiling
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor untreated
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain DS2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10294592 Haloferax volcanii DS2 Cellular culture 0.0 Ribo-Seq untreated
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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