SRR10294598 (PRJNA577942)

Processing Status: Completed

General Details

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Sample Name GSM4125808
Organism Haloferax volcanii DS2
Release Date 4/2020

Sample Links

Run Details

Spots 15432004
Total Bases 1543200400
Total Bases 1543200400

Repository Details

SRA SRR10294598
ENA SRR10294598
BioProject PRJNA577942

Experiment Details

Title Flash freeze harvesting with serine hydroxamate ribosome profiling

Sample Details

Run Accession SRR10294598
Total Number Of Spots (Original File)) 15432004
Total Number Of Bases (Original File) 1543200400
Average Read Length 100
Original File Size (Mb) 714
Experiment Id SRX7007426
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP225954
Pubmed Id 32382758
Sample SRS5528596
Biosample SAMN13041929
Sample Type simple
Organism Taxid 309800
Organism Haloferax volcanii DS2
Sample Name GSM4125808
Center Name GEO
Submission SRA980319
Month 4
Year 2020
Author Gelsinger
Sample Source Cellular culture
Sample Title Flash freeze harvesting with serine hydroxamate ribosome profiling
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor Frozen
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain DS2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10294598 Haloferax volcanii DS2 Cellular culture 0.0 Ribo-Seq Frozen
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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