SRR10294600 (PRJNA577942)

Processing Status: Not Yet Started

General Details

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Sample Name GSM4125810
Organism Haloferax volcanii DS2
Release Date 4/2020

Sample Links

Run Details

Spots 8365069
Total Bases 418253450
Total Bases 418253450

Repository Details

SRA SRR10294600
ENA SRR10294600
BioProject PRJNA577942

Experiment Details

Title Total RNA treated with MNase ribosome profiling

Sample Details

Run Accession SRR10294600
Total Number Of Spots (Original File)) 8365069
Total Number Of Bases (Original File) 418253450
Average Read Length 50
Original File Size (Mb) 262
Experiment Id SRX7007428
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP225954
Pubmed Id 32382758
Sample SRS5528598
Biosample SAMN13041923
Sample Type simple
Organism Taxid 309800
Organism Haloferax volcanii DS2
Sample Name GSM4125810
Center Name GEO
Submission SRA980319
Month 4
Year 2020
Author Gelsinger
Sample Source Cellular culture
Sample Title Total RNA treated with MNase ribosome profiling
Library-Type RNA-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain DS2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10294600 Haloferax volcanii DS2 Cellular culture 0.0 RNA-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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