SRR1272130 (PRJNA246300)

Processing Status: Completed

General Details

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Sample Name GSM1379696
Organism Trypanosoma brucei
Release Date 5/2014

Sample Links

Run Details

Spots 98760826
Total Bases 3555389736
Total Bases 3555389736

Repository Details

SRA SRR1272130
ENA SRR1272130
BioProject PRJNA246300

Experiment Details

Title PCF RiboProf replicate_1

Sample Details

Run Accession SRR1272130
Total Number Of Spots (Original File)) 98760826
Total Number Of Bases (Original File) 3555389736
Average Read Length 36
Original File Size (Mb) 2257
Experiment Id SRX533748
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP041705
Pubmed Id 25331479
Sample SRS602475
Biosample SAMN02746303
Sample Type simple
Organism Taxid 5691
Organism Trypanosoma brucei
Sample Name GSM1379696
Center Name GEO
Submission SRA161745
Month 5
Year 2014
Author Jensen
Sample Source Tb927 PCF in SDM79 medium
Sample Title PCF RiboProf replicate_1
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage Procyclic Form
Gene 0.0
Sex 0.0
Strain 927
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1272130 Trypanosoma brucei Tb927 PCF in SDM79 medium 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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