SRR1272137 (PRJNA246300)

Processing Status: Completed

General Details

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Sample Name GSM1379703
Organism Trypanosoma brucei
Release Date 5/2014

Sample Links

Run Details

Spots 38236277
Total Bases 1376505972
Total Bases 1376505972

Repository Details

SRA SRR1272137
ENA SRR1272137
BioProject PRJNA246300

Experiment Details

Title cBF RiboProf replicate_2

Sample Details

Run Accession SRR1272137
Total Number Of Spots (Original File)) 38236277
Total Number Of Bases (Original File) 1376505972
Average Read Length 36
Original File Size (Mb) 886
Experiment Id SRX533755
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP041705
Pubmed Id 25331479
Sample SRS602482
Biosample SAMN02746315
Sample Type simple
Organism Taxid 5691
Organism Trypanosoma brucei
Sample Name GSM1379703
Center Name GEO
Submission SRA161745
Month 5
Year 2014
Author Jensen
Sample Source Tb427 grown in vitro in HMI-9 medium
Sample Title cBF RiboProf replicate_2
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage cultrured bloodstream Form
Gene 0.0
Sex 0.0
Strain 427
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1272137 Trypanosoma brucei Tb427 grown in vitro in HMI-9 medium 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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