SRR2016459 (PRJNA283800)

Processing Status: Completed

General Details

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Sample Name GSM1680887
Organism Escherichia coli
Release Date 7/2015

Sample Links

Run Details

Spots 35362647
Total Bases 1273055292
Total Bases 1273055292

Repository Details

SRA SRR2016459
ENA SRR2016459
BioProject PRJNA283800

Experiment Details

Title heat RPF

Sample Details

Run Accession SRR2016459
Total Number Of Spots (Original File)) 35362647
Total Number Of Bases (Original File) 1273055292
Average Read Length 36
Original File Size (Mb) 1445
Experiment Id SRX1023518
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer IIx
Sra Project Accession (Srp) SRP058200
Pubmed Id 26857681
Sample SRS933229
Biosample SAMN03652527
Sample Type simple
Organism Taxid 1403831
Organism Escherichia coli
Sample Name GSM1680887
Center Name GEO
Submission SRA267717
Month 7
Year 2015
Author Bartholomäus
Sample Source E. coli MC4100, heat
Sample Title heat RPF
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain MC4100
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition LB
Stress heat stress 7 min 47°C
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2016459 Escherichia coli E. coli MC4100, heat 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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