SRR2016461 (PRJNA283800)
Processing Status: Completed
General Details
Sample Name | GSM1680889 |
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Organism | Escherichia coli |
Release Date | 7/2015 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 31494400 |
---|---|
Total Bases | 1133798400 |
Total Bases | 1133798400 |
Repository Details
SRA | SRR2016461 |
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ENA | SRR2016461 |
BioProject | PRJNA283800 |
Experiment Details
Title | MM RPF |
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Sample Details
Run Accession | SRR2016461 |
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Total Number Of Spots (Original File)) | 31494400 |
Total Number Of Bases (Original File) | 1133798400 |
Average Read Length | 36 |
Original File Size (Mb) | 1247 |
Experiment Id | SRX1023520 |
Library Name | 0.0 |
Library Strategy | RNA-Seq |
Library Selection | cDNA |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina Genome Analyzer IIx |
Sra Project Accession (Srp) | SRP058200 |
Pubmed Id | 26857681 |
Sample | SRS933227 |
Biosample | SAMN03652529 |
Sample Type | simple |
Organism Taxid | 1403831 |
Organism | Escherichia coli |
Sample Name | GSM1680889 |
Center Name | GEO |
Submission | SRA267717 |
Month | 7 |
Year | 2015 |
Author | Bartholomäus |
Sample Source | E. coli MC4100, MM |
Sample Title | MM RPF |
Library-Type | Ribo-Seq |
Replicate-Number | 0.0 |
Condition | Test |
Inhibitor | 0.0 |
Timepoint | NANA |
Tissue | 0.0 |
Cell-Line | 0.0 |
Cellular-Compartment | 0.0 |
Stage | 0.0 |
Gene | 0.0 |
Sex | 0.0 |
Strain | MC4100 |
Age | 0.0 |
Infected | 0.0 |
Disease | 0.0 |
Genotype | 0.0 |
Feeding | 0.0 |
Temperature | 0.0 |
Sirna | 0.0 |
Sgrna | 0.0 |
Shrna | 0.0 |
Plasmid | 0.0 |
Growth-Condition | MM medium (12.8 g/l Na2HPO4×7H2O, 3 g/l KH2PO4, 1 g/l NH4Cl, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose) |
Stress | No / MM medium |
Cancer | 0.0 |
Microrna | 0.0 |
Individual | 0.0 |
Antibody Used | 0.0 |
Ethnicity | 0.0 |
Dose | 0.0 |
Stimulation | 0.0 |
Host Organism | 0.0 |
Unique Molecular Identifier (Umi) | 0.0 |
Adapter Sequence | 0.0 |
Mode Of Separation | 0.0 |
Mode Of Rrna Depletion | 0.0 |
Barcode Information | 0.0 |
Nucelase Used | 0.0 |
Kit Used | 0.0 |
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