SRR2016461 (PRJNA283800)

Processing Status: Completed

General Details

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Sample Name GSM1680889
Organism Escherichia coli
Release Date 7/2015

Sample Links

Run Details

Spots 31494400
Total Bases 1133798400
Total Bases 1133798400

Repository Details

SRA SRR2016461
ENA SRR2016461
BioProject PRJNA283800

Experiment Details

Title MM RPF

Sample Details

Run Accession SRR2016461
Total Number Of Spots (Original File)) 31494400
Total Number Of Bases (Original File) 1133798400
Average Read Length 36
Original File Size (Mb) 1247
Experiment Id SRX1023520
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer IIx
Sra Project Accession (Srp) SRP058200
Pubmed Id 26857681
Sample SRS933227
Biosample SAMN03652529
Sample Type simple
Organism Taxid 1403831
Organism Escherichia coli
Sample Name GSM1680889
Center Name GEO
Submission SRA267717
Month 7
Year 2015
Author Bartholomäus
Sample Source E. coli MC4100, MM
Sample Title MM RPF
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain MC4100
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition MM medium (12.8 g/l Na2HPO4×7H2O, 3 g/l KH2PO4, 1 g/l NH4Cl, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose)
Stress No / MM medium
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2016461 Escherichia coli E. coli MC4100, MM 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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