SRR2188088 (PRJNA294100)
Processing Status: Completed
General Details
Sample Name | GSM1862952 |
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Organism | Trypanosoma brucei |
Release Date | 12/2015 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 64636189 |
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Total Bases | 2326902804 |
Total Bases | 2326902804 |
Repository Details
SRA | SRR2188088 |
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ENA | SRR2188088 |
BioProject | PRJNA294100 |
Experiment Details
Title | PCF RiboProf replicate_3 reanalysis |
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Sample Details
Run Accession | SRR2188088 |
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Total Number Of Spots (Original File)) | 64636189 |
Total Number Of Bases (Original File) | 2326902804 |
Average Read Length | 36 |
Original File Size (Mb) | 1382 |
Experiment Id | SRX1166330 |
Library Name | 0.0 |
Library Strategy | RNA-Seq |
Library Selection | cDNA |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina Genome Analyzer II |
Sra Project Accession (Srp) | SRP062914 |
Pubmed Id | 26393539 |
Sample | SRS1046665 |
Biosample | SAMN04014719 |
Sample Type | simple |
Organism Taxid | 5691 |
Organism | Trypanosoma brucei |
Sample Name | GSM1862952 |
Center Name | GEO |
Submission | SRA291745 |
Month | 12 |
Year | 2015 |
Author | Parsons |
Sample Source | Tb927 PCF in SDM79 medium |
Sample Title | PCF RiboProf replicate_3 reanalysis |
Library-Type | Ribo-Seq |
Replicate-Number | 0.0 |
Condition | Test |
Inhibitor | 0.0 |
Timepoint | NANA |
Tissue | 0.0 |
Cell-Line | 0.0 |
Cellular-Compartment | 0.0 |
Stage | Procyclic Form |
Gene | 0.0 |
Sex | 0.0 |
Strain | 927 |
Age | 0.0 |
Infected | 0.0 |
Disease | 0.0 |
Genotype | 0.0 |
Feeding | 0.0 |
Temperature | 0.0 |
Sirna | 0.0 |
Sgrna | 0.0 |
Shrna | 0.0 |
Plasmid | 0.0 |
Growth-Condition | 0.0 |
Stress | 0.0 |
Cancer | 0.0 |
Microrna | 0.0 |
Individual | 0.0 |
Antibody Used | 0.0 |
Ethnicity | 0.0 |
Dose | 0.0 |
Stimulation | 0.0 |
Host Organism | 0.0 |
Unique Molecular Identifier (Umi) | 0.0 |
Adapter Sequence | 0.0 |
Mode Of Separation | 0.0 |
Mode Of Rrna Depletion | 0.0 |
Barcode Information | 0.0 |
Nucelase Used | 0.0 |
Kit Used | 0.0 |
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