SRR5266620 (PRJNA375739)

Processing Status: Completed

General Details

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Sample Name GSM2493798
Organism Escherichia coli
Release Date 2/2017

Sample Links

Run Details

Spots 17442287
Total Bases 610480045
Total Bases 610480045

Repository Details

SRA SRR5266620
ENA SRR5266620
BioProject PRJNA375739

Experiment Details

Title EHEC in LB Experiment 2 [RIBO-Seq]

Sample Details

Run Accession SRR5266620
Total Number Of Spots (Original File)) 17442287
Total Number Of Bases (Original File) 610480045
Average Read Length 35
Original File Size (Mb) 387
Experiment Id SRX2570694
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina MiSeq
Sra Project Accession (Srp) SRP100156
Pubmed Id 28245801
Sample SRS1986953
Biosample SAMN06344516
Sample Type simple
Organism Taxid 155864
Organism Escherichia coli
Sample Name GSM2493798
Center Name GEO
Submission SRA538687
Month 2
Year 2017
Author Neuhaus
Sample Source biomass collected in the transition between exponential to stationary phase
Sample Title EHEC in LB Experiment 2 [RIBO-Seq]
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition LB medium
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5266620 Escherichia coli biomass collected in the transition between exponential to stationary phase 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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