FastQCFastQC Report
Thu 22 Jun 2023
DRR277052_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameDRR277052_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57946603
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length10-39
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC23906434.125596456448016No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC17685903.0521029852258983No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC9687711.671833981363843No Hit
TCGGTTGGCCTCGGATAGCCGGTC4706500.8122132715872923No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA4307960.743436159665822No Hit
CCGGGGTCCGGTGCGGAGTGCCCTT3391770.5853268050933028No Hit
TTGGTGACTCTAGATAACCTCG3233250.557970585437079No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA3133970.5408375707545791No Hit
CCGGGGTCCGGTGCGGAGTGCCCT3094420.5340123216541269No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC2965670.5117935903852725No Hit
CGGTTGGCCTCGGATAGCCGGTC2721800.4697082933403361No Hit
AACGATGCCGACCGGCGATGCGGCGGCG2603220.44924462612588356No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT2596340.44805732615594396No Hit
ACCGGGGTCCGGTGCGGAGTGCCCTT2553100.44059528390300984No Hit
CAGTGGCTGGTTGAGAT2452360.4232103131222378No Hit
AACTGTGGTAATTCTAGAGCT2423380.4182091571442074No Hit
ACCGGGGTCCGGTGCGGAGTGCCCT2388700.41222433694689575No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG2284960.3943216481559756No Hit
TTGGTGACTCTAGATAACCTC2057660.35509588025375705No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1934330.33381249285657005No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA1927960.33271320494835566No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT1790070.30891715947525No Hit
TAACTGTGGTAATTCTAGAGCT1708310.29480761797201466No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT1688540.2913958562851389No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1634300.2820355146616619No Hit
TTTGGTGACTCTAGATAACCTC1623320.28014066674452No Hit
AGATAACCTCGGGCCGATCGCAC1550140.2675117987503081No Hit
ATGCGTGCATTTATCAGA1547540.2670631098081798No Hit
TCGGGCCGATCGCAC1530540.26412937441734075No Hit
ACGATGCCGACCGGCGATGCGGCGGCG1475620.25465168337823013No Hit
ATTGATCATCGACACTTCGAACGCA1419950.2450445628365825No Hit
ATAACCTCGGGCCGATCGCAC1330590.2296234690409721No Hit
CTAGATAACCTCGGGCCGATCGCAC1312180.22644640618536346No Hit
TAGATAACCTCGGGCCGATCGCAC1285690.22187495615575603No Hit
TTTTGGTGACTCTAGATAACCTC1207880.20844707669921567No Hit
AGCTAGGAATAATGGAAT1200920.20724597091567212No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA1047040.1806904884484773No Hit
TTTGGTGACTCTAGATAACCTCG1045500.1804247265366013No Hit
TTAGATAACCTCGGGCCGATCGCAC1036900.17894060157417682No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC1013960.17498178452324462No Hit
ACCTCGGGCCGATCGCAC987880.17048108928835742No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG983550.16973384962704371No Hit
GGTTGGCCTCGGATAGCCGGTC936950.16169196320274373No Hit
AACCTCGGGCCGATCGCAC918160.15844932273251636No Hit
CCGGGGTCCGGTGCGGAGTGCCCTTC910490.15712569035323778No Hit
CCTGCGGAAGGATCATTA882350.1522694954180489No Hit
GTTGGCCTCGGATAGCCGGTC881700.15215732318251685No Hit
AGCAGTGGCTGGTTGAGATTT822060.14186508914077328No Hit
GTTGGCCTCGGATAGCCGGTCCCC813140.14032574092393302No Hit
TCGGTTGGCCTCGGATAGCCGGTCCCC813010.1403033064768266No Hit
CGGGGTCCGGTGCGGAGTGCCCTT796760.13749900058852457No Hit
ATGTACACTAGGGATAACAGGGTAATCAACGCGA771620.13316052366348377No Hit
GTCCGGTGCGGAGTGCCCTT759890.13113624624380482No Hit
ACTGTGGTAATTCTAGAGCT737610.1272913271551052No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA727250.12550347429339387No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG724300.12499438491674827No Hit
GTCCGGTGCGGAGTGCCCTTC708380.12224702800956253No Hit
ACCGGGGTCCGGTGCGGAGTGCCCTTC702890.12129960405099155No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT690750.11920457183659239No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT683040.11787403655051185No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC663030.11442085742282425No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT661940.11423275321247046No Hit
TCGCTTCTGGCGCCAAGCGCCCGG643250.11100737000924799No Hit
CAGCTAGGAATAATGGAAT638800.11023942162752837No Hit
CGGTTGGCCTCGGATAGCCGGTCCCC637330.10998573980255581No Hit
TAGGAATAATGGAAT626680.10814784086653018No Hit
TTGGTGACTCTAGATAACCTCGG615360.10619431824157148No Hit
TAACCTCGGGCCGATCGCAC615160.1061598037075616No Hit
CCTGCGGAAGGATCATTAACGGAG614270.10600621403121767No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC605710.10452899197559518No Hit
AGGAATAATGGAAT587320.10135538057338754No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)