FastQCFastQC Report
Mon 26 Jun 2023
ERR10323167_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323167_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13490316
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1681031.2461012773903888No Hit
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1654361.2263315403434583No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA748770.5550425949992572No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA741850.5499129894362741No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA480220.3559738704415819No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA294050.217971172802772No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA194580.14423679919729085No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA167640.12426691858070633No Hit
ACCGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA157120.1164687320890037No Hit
TTTCAGGGTTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA153890.11407442197795813No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA151370.11220641532785444No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA151010.11193955723498249No Hit
AGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA147770.1095378343991349No Hit
TTGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA137290.10176929880664025No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)