FastQCFastQC Report
Mon 26 Jun 2023
ERR10323168_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323168_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9663588
Total Bases976 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1312451.3581394405473413No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1102851.1412427764925408No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA531390.5498889232446582No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA500640.5180684441431072No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA329280.34074300353036574No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA183130.18950518171925376No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA152070.1573639107958659No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA138040.14284549382693054No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA129500.13400819654149163No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA122950.1272301757897791No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG114520.11850670786047585No Hit
TTTCAGGGTTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA106880.11060074167069209No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG104710.10835519891783466No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG102050.10560259812400943No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA101440.10497136260362093No Hit
AGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA98960.10240502802892673No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)