FastQCFastQC Report
Mon 26 Jun 2023
ERR10323177_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323177_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29508300
Total Bases2.9 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1299780.44047945832189583No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA714500.2421352636376884No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG658660.22321177431434544No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG577680.19576864814306486No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA490380.1661837516902024No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA482130.1633879281422515No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA442150.14983919778503No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG439090.14880220141451728No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG432680.14662993123968512No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG423550.14353588651328608No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG384210.130204044285845No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA357880.1212811310715968No Hit
CGCATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA336000.1138662681347282No Hit
CCCAGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA335930.11384254599553346No Hit
CGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA331220.11224638491543057No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG325560.11032828051768485No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA299400.10146297821290959No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)