FastQCFastQC Report
Mon 26 Jun 2023
ERR10323179_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323179_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12406431
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA708010.5706798353208913No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG353530.28495705170971414No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG311160.25080540890446257No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG271160.21856406568496614No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG258800.20860149063014174No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA231770.18681440294956705No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG228020.18379177702273927No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA201420.16235128378177416No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA198140.15970749363777545No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA191560.15440379267816828No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG190320.1534043110383639No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG189420.15267888081592523No Hit
CCCAGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA178950.14423970922822205No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA148250.11949447830725855No Hit
CCCGGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA145820.11753581670667414No Hit
CCCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG134340.10828255120267868No Hit
CGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA129030.10400251289029053No Hit
GGCGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT126320.10181816188716965No Hit
CGCATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA125770.10137484341790157No Hit
CCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA124100.10002876733848759No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)