FastQCFastQC Report
Mon 26 Jun 2023
ERR10323180_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323180_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9091559
Total Bases918.2 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA379800.4177501350428458No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA301100.3311863234897337No Hit
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA286490.31511647232339357No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA240810.2648720642961235No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA189410.20833610605177835No Hit
CGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC180720.1987777893758375No Hit
CGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA170170.18717361895798068No Hit
GGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA144410.15883964455381086No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG124650.13710519834937No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG124540.13698420699904165No Hit
CGCATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA123040.13533432494910938No Hit
CGTCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA120690.13274950973754887No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG119110.1310116339782869No Hit
CGATTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA117820.12959273541534516No Hit
CGGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA116350.12797585100641154No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG115350.12687592963979005No Hit
CGGCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA114310.1257320114185037No Hit
CGTAAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC106290.11691064205819927No Hit
GCTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA105100.11560173563191967No Hit
CGCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC101830.11200499276306736No Hit
CCCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG101720.111884001412739No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA99570.10951917047450278No Hit
GGACTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA96780.1064503898616288No Hit
CGACTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA94450.1038875730774007No Hit
CGCGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA91040.10013684121722138No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)