FastQCFastQC Report
Mon 26 Jun 2023
ERR10323181_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323181_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13678031
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA558920.4086260661348114No Hit
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA476210.3481568363165722No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA439760.3215082638721904No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA353850.25869951603414265No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA276760.20233906473819224No Hit
CGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC265540.19413612968123847No Hit
CGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA257380.18817035873072666No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG206320.15084042432715644No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG204430.14945864649670704No Hit
GGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA194860.14246202541871705No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG193130.14119722348925806No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG187270.13691298111548367No Hit
CGCATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA180460.1319341943295786No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA178410.13043544059813872No Hit
CGATTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA173820.12707969443847583No Hit
CGTCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA172380.12602691132956198No Hit
CGGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA171760.12557362971322408No Hit
CGGCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA164370.1201708052862287No Hit
CCCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG160600.11741456061914175No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA154260.11277939054239607No Hit
CGTAAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC152030.11114903892234197No Hit
CGCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC147670.10796144562035281No Hit
GCTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA146530.10712799232579602No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)