FastQCFastQC Report
Mon 26 Jun 2023
ERR10323183_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323183_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6762050
Total Bases682.9 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG843251.2470330742896016No Hit
CCTTGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG615000.909487507486635No Hit
CCTCGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG426360.6305188515317101No Hit
CCATGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG345480.5109101529861506No Hit
CCGCGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG308630.4564148446107319No Hit
CCACGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG302960.44802981344414783No Hit
CCCTGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG290830.4300914663452652No Hit
CCCGGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG283440.4191628278406696No Hit
CCGTGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG267150.39507250020334067No Hit
CCAGGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG266050.3934457745801939No Hit
CCAAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG263180.38920149954525624No Hit
CCCCGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG247430.3659097463047449No Hit
CCCAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG245140.36252319932564825No Hit
CCTGGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG209950.3104827677997057No Hit
CCGAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG206000.304641343971133No Hit
CCTAATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG204130.3018759104117834No Hit
CTTAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG173720.2569043411391516No Hit
CCGGGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG173440.2564902655259869No Hit
CCTAAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCG163870.24233775260460955No Hit
CCTAATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGG141920.20987718221545243No Hit
CCTTATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG140270.20743709378073216No Hit
CCTATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGGC129230.19111068389024038No Hit
ACGGACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC116130.17173786056003726No Hit
CCTCATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG101910.15070873477717556No Hit
CACGACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC101340.14986579513609039No Hit
CCTTATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGG97420.14406873655178534No Hit
AGCCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA96380.14253074141717378No Hit
CCCGATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG94500.1397505194430683No Hit
CCCAATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG93100.13768014137724507No Hit
CCTTAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCG91180.13484076574411605No Hit
TGCCGAAGGCAGCAGGCGCGCAAATTACCCAATCCCGACACGGGGAGGTA91140.13478161208509254No Hit
CTATGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG86860.1284521705695758No Hit
CCCTATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG85300.12614517786765847No Hit
CCCGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGG84500.12496210468718805No Hit
CCTTTACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGGC84180.1244888754149999No Hit
CCCCATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG83830.12397128089854408No Hit
AACCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA81650.12074740648176219No Hit
CTAAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG78740.11644397778780105No Hit
CCAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGG78650.11631088205499812No Hit
CCATATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG76700.11342714117760146No Hit
CCTCATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGG74090.10956736492631672No Hit
CTAGGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG73430.10859132955242862No Hit
CCTCTACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGGGC72010.10649137465709364No Hit
CCGCATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG68490.10128585266302378No Hit
CTACGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG67920.10044291302193861No Hit
CCACATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG67690.10010277948255338No Hit
CTTAATGATTAATAGGGATAGTCGGGGGCATTCGTATTCAATTGTCAGAG67660.10005841423828574No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)