FastQCFastQC Report
Mon 26 Jun 2023
ERR10323188_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323188_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7642629
Total Bases771.9 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA667210.8730111065184506No Hit
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA663530.8681960095145271No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA349470.4572641168372821No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA348380.45583790603992425No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA312730.40919165381441386No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA228720.2992687463960373No Hit
AGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA184400.24127823030530463No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA133930.17524074503681913No Hit
CCCCCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG127980.16745546591362737No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA117660.15395225909827628No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA97150.12711594400303874No Hit
GGTATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA93200.12194756542545765No Hit
CGCCCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG91940.12029891808172292No Hit
GTAGATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA86670.11340338514403878No Hit
TTGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA83910.10979206239109605No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA82500.10794714750644052No Hit
CCCGTAGGTCAGCATCAGTTTTCGGGGGCGGAAAAAGAATAAGGGAAGGT79710.10429657124531364No Hit
CCCGCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG79530.10406105019620866No Hit
GCCCCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG76990.1007375865032831No Hit
CCCCTAGGTCAGCATCAGTTTTCGGGGGCGGAAAAAGAATAAGGGAAGGT76730.10039738943235371No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)