FastQCFastQC Report
Mon 26 Jun 2023
ERR10323192_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323192_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11652613
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA2249011.9300477927139605No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1615201.3861268712862944No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA771030.661679916770599No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA701380.6019079154177694No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA458920.39383441293382004No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA253940.21792537004361165No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA226830.19466020196500133No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA189700.1627961041871038No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA179960.1544374639404913No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA170910.14667096555939857No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT162960.1398484614566707No Hit
CGGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATC158260.13581503135820266No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA140080.1202133804666816No Hit
AGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA131110.1125155362149245No Hit
ACCGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA129930.111502887807224No Hit
TTGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA129420.11106521773270939No Hit
GGCGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT125550.10774407422609847No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG125380.10759818420126026No Hit
CAGGCTCTCCTGTATCGTAGAAGATGGGCGATGGTTGATGAAACGGAAGT124650.10697171527107269No Hit
CGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA121150.10396809711263903No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG120110.10307559343127588No Hit
AGGGCTCTCCTGTATCGTAGAAGATGGGCGATGGTTGATGAAACGGAAGT118210.10144505785955477No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)