FastQCFastQC Report
Mon 26 Jun 2023
ERR10323193_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323193_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9623349
Total Bases971.9 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1628801.692550067549249No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1117511.1612485424772603No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA543160.5644188940877027No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA499920.519486511400553No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA307610.3196496354855259No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA198970.20675754355370465No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA194110.2017073266281832No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA171950.17868000007066148No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA162420.16877700268378504No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA128120.13313452520531055No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA124100.12895718527926192No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT118610.12325231060413583No Hit
CGGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATC117150.12173516724790924No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG114890.11938671246361322No Hit
ACCGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA110770.11510545860905594No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG110110.11441962668089871No Hit
GGCGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT96680.10046398608218407No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)