FastQCFastQC Report
Mon 26 Jun 2023
ERR10323194_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323194_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10011810
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1545991.5441663395529879No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1339671.3380897160453504No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA670570.6697789910116153No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA595200.5944978979824828No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA387970.38751234791710987No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA201390.20115243896957694No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA191150.19092451814407185No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA176070.17586230661588664No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA167190.16699278152501895No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG128860.12870799585689302No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA127350.12719977706328825No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG125080.12493245477091554No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA125040.12489250195519093No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT110570.11043957086680631No Hit
TTGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA105210.10508589355970599No Hit
AGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA101960.10183972728207986No Hit
CGGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATC101840.10171986883490598No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)