FastQCFastQC Report
Mon 26 Jun 2023
ERR10323197_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323197_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9959313
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT219490.22038668731467725No Hit
CAACTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT217830.21871990568024122No Hit
AACCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA217200.2180873319274131No Hit
CAAATACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT210160.21101857126088916No Hit
AGCCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA198690.19950171261812938No Hit
CACGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT174810.17552415512997735No Hit
CAATACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC167670.16835498593125853No Hit
AACTTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA167470.16815416886686863No Hit
CACGACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC155780.15641641145327995No Hit
ACGGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT152830.1534543597535292No Hit
CAGCTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT151460.1520787628624585No Hit
AACATACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA145120.14571286192129917No Hit
ACGGACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC143970.14455816380105738No Hit
CAGTTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT142050.14263031998291448No Hit
CAAGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT137010.13756972996028943No Hit
CAAAACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC135760.13631462330785266No Hit
CCTAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTAGGGATCGG133580.13412571730600295No Hit
AGCTTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA129510.13003909004566883No Hit
CAACACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC124490.12499858172948274No Hit
ACCATACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA123150.12365310739807053No Hit
AACGTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA121900.12239800074563376No Hit
CACTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC117670.11815071983378775No Hit
CAGGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT112550.11300980298540673No Hit
CATATACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT108690.10913403364268198No Hit
CACATACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT106140.10657361607171097No Hit
CCAGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT105160.10558961245620055No Hit
AATCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA104620.10504740638234786No Hit
TAAGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT102440.10285850038049814No Hit
CACTTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT102010.10242674369205988No Hit
CAGTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC101680.10209539553581659No Hit
ACCCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTA101540.10195482359074365No Hit
CAGCACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAATC100960.101372454104013No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)