FastQCFastQC Report
Mon 26 Jun 2023
ERR10323201_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323201_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12336690
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA975950.7910955045478164No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA822030.6663294611439535No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG399720.32400911427619566No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG339900.2755196085822048No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA294720.2388971433990803No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG290190.23522516979838187No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA242130.19626820484262797No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG230070.18649248704474214No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG192720.156216943118454No Hit
CAGCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG183990.14914049068267096No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA177330.14374195995846537No Hit
AGCCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG169720.13757336854537158No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG159590.12936208983122702No Hit
AGCATCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG157350.12754636778584855No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG156990.12725455531426988No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT155800.12628995297766257No Hit
CAAGCTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAA137520.11147236414305621No Hit
GTAGATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA126910.1028720021334734No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA123470.10008357184949934No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)