FastQCFastQC Report
Mon 26 Jun 2023
ERR10323202_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323202_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6743223
Total Bases681 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA511830.7590287315131059No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA406120.6022639322472355No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG216280.32073683459674995No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG183680.27239200008660547No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG159210.2361037147963222No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA144210.2138591590401207No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG144050.21362188377872124No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA121900.18077408977873044No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG120630.17889071739137205No Hit
CAGCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG102220.15158923262659413No Hit
AGCCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG95430.1415198637209536No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG93110.13807937243066112No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG91780.13610702182027792No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA91340.13545451485142934No Hit
AGCATCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG84060.12465849045775292No Hit
CAAGCTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAA83980.12453985282705317No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT79990.11862280099590358No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA72770.10791575482525197No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA68610.10174659802886542No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)