FastQCFastQC Report
Mon 26 Jun 2023
ERR10323203_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323203_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15004064
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1381770.9209304892327839No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1085050.7231707356086992No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG523880.3491587345935075No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG452130.30133835739437No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA388810.25913645796232276No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG375250.25009890653625577No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG327340.21816755780300592No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA324280.21612811035730053No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG267500.17828502997587853No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA241510.16096305640925018No Hit
CAGCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG240980.16060981877976527No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT227530.15164558082396876No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG226240.15078581376352435No Hit
AGCCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG219330.14618039485835305No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG215700.14376105033942804No Hit
AGCATCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG208510.13896901532811376No Hit
CAAGCTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAA191100.12736549244258089No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA185810.12383978100866538No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA173570.11568199122584388No Hit
GGCGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT169560.11300938199143912No Hit
CCCAGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA165820.11051672400224366No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA165420.11025012956489655No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA163640.10906378431870191No Hit
GTAGATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA162840.1085305954440077No Hit
AGCGTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG160500.10697101798552713No Hit
AGCTTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG150170.10008621664103806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)