FastQCFastQC Report
Thu 29 Jun 2023
ERR10323204_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323204_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17413518
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1043820.5994308559591462No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA468800.269216134269939No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA402460.2311192947915522No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA365510.20990014768985799No Hit
CCCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG311290.17876341816742602No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA283180.16262078690819395No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG281790.16182255647595162No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG273120.1568436659381522No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA256790.14746589402554958No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG249590.1433311752398338No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG243050.13957547234280862No Hit
CCAGTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG242980.1395352736879475No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG237750.13653185990332337No Hit
CCCATGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG230820.13255219307207194No Hit
CCCCGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTGA228350.1311337548219722No Hit
CGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC221590.1272517132953835No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA218660.12556911245619637No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA218540.12550020047643445No Hit
CCCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG214690.12328927445907255No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG203010.11658184176224472No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA201650.11580083932494284No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG197850.11361862663248172No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA192180.11036253558873055No Hit
CGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA186490.10709495921501905No Hit
ACCGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA186050.10684228195589197No Hit
GTAGATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA183230.10522285043148662No Hit
CCCGTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG181130.10401689078565284No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)