FastQCFastQC Report
Mon 26 Jun 2023
ERR10323206_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323206_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19233736
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1443110.7503014494947835No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG822490.4276288288453164No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG702680.36533723869351226No Hit
CCCATGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG615890.3202134000383493No Hit
CCCGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG597830.310823648614081No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG582190.30269210308387307No Hit
CCCTTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG498820.25934639011370436No Hit
AGCCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG368590.19163723574036787No Hit
CAAGCTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAA363570.18902723838987912No Hit
CAGCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG347240.18053694820392668No Hit
CGGCCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAAT343170.17842087465482526No Hit
CCCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG342840.17824930112381704No Hit
CCCAGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA308590.1604420482843271No Hit
AGCATCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG298270.15507647604188807No Hit
CAACTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAAT294060.15288761372205587No Hit
CCCTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA277300.14417375802600182No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA272880.14187571255007347No Hit
CCCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG272750.14180812297725207No Hit
CCCGGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGA266920.13877699059610676No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA244520.12713078727918486No Hit
TGCTGAGATTAAGCCTTTGTTCCCAAGATTTGTAATCTGGAATTCTCGGG240730.12516029127154496No Hit
AGCTTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG236880.123158600076449No Hit
CAGGCTACTTGGATAACCGTGGTAATTCTAGAGCTAATACATGCTAAAAA235390.12238391958795732No Hit
AGCGTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACG230460.11982071501865264No Hit
CCCATGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG228220.11865609468696045No Hit
CCCGTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGGACTG227930.11850531794758959No Hit
CCAGTGCCTGGGGAGTGTTTATAGCCCTTGTTGTAATACGTCCACTGGGG216800.11271861067449403No Hit
TGCTGAGATTAAGCCTTTGTTCCCAAGATTTGTAAACTGGAATTCTCGGG198630.10327166807322301No Hit
CGGCATACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATC195350.10156633115895944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)