FastQCFastQC Report
Mon 26 Jun 2023
ERR10323211_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR10323211_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14790624
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA1362600.9212593058954105No Hit
AAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA756740.5116349384583098No Hit
CGTTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA691120.46726899419524154No Hit
CGTATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA547140.36992354075122186No Hit
CGCTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA449560.30394931275380943No Hit
TAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA427000.28869640658839No Hit
AGGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA400870.27102980915477265No Hit
GAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA393510.26605368373910393No Hit
CGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA381810.25814326697778267No Hit
CCCCCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG340110.22994973031563778No Hit
CGCCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA331180.22391212162515928No Hit
CGTGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA327830.22164717323623398No Hit
AGCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG299360.20239849245035232No Hit
CGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC298940.2021145287717408No Hit
CGCCCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG271530.1835825182223549No Hit
CCCGTAGGTCAGCATCAGTTTTCGGGGGCGGAAAAAGAATAAGGGAAGGT264830.17905262144450432No Hit
AGCGCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG258850.17500951954427346No Hit
AGCTCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG256180.17320432187310017No Hit
GTAGATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA255260.17258230619614157No Hit
CCCCTAGGTCAGCATCAGTTTTCGGGGGCGGAAAAAGAATAAGGGAAGGT242830.16417833351723363No Hit
CGATTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA230660.15595014787746617No Hit
CGCATAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA227560.15385422548771438No Hit
CCCGCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG227330.15369872156847472No Hit
GCCCCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG217620.1471337517605748No Hit
CCCACGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG205520.13895289340057593No Hit
CGTCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA204600.13833087772361735No Hit
AGGTTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA197760.13370632638622953No Hit
CGGTTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA194320.13138052863760177No Hit
CGTAAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC186020.12576886546504057No Hit
CCCTCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTCG180090.1217595687646444No Hit
GCACATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA177130.1197583009344298No Hit
CGCTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAAC176110.1190686748578018No Hit
CGACTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA167540.11327446360613319No Hit
CGCGTAAAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAA167120.11299049992752165No Hit
AGCCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG163520.11055652553942281No Hit
TGTAATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGGA163330.11042806578005093No Hit
CAGGTACGCCGGTGAAATACCACTACCTTTATCGTTTCTTTACTTAATCA155550.10516797668577067No Hit
CAGCCATGCTGAATCCGGTGCGCTCTCGACGGCCCTTGAAAATCCAACGG151020.10210522558074628No Hit
CCCCGCGAGACTATGCACTCTGAACCTGTGGTAGGTCAGCATCAGTTTTC149850.10131418390461418No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)