FastQCFastQC Report
Thu 22 Jun 2023
ERR1190990_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1190990_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55544297
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT36325036.539830722855309No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT19025633.425307552276699No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT17814313.2072257571285854No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC15670462.8212545385172487No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC15645702.81679683514583No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT13916702.5055137523839757No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG13473512.4257233825463667No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC11102791.99890728655725No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC9678391.742463317161076No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT8929911.6077096087830582No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG8332181.5000964005359543No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT7264501.3078750461095943No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC7186381.2938105958925No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG6753301.2158403949193919No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG6712701.2085309136237696No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA6532271.1760469306146768No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT6017221.0833191389567862No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA5957671.072597966268256No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT5165130.9299118503561221No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC4459320.8028402987979126No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT4449910.8011461554729913No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT4277290.7700682574126377No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT3913090.704498969534172No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA3906230.703263919246291No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA3895670.7013627339634887No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT3422060.6160956542487162No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA3351620.6034138842372961No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT3000900.5402714881781653No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG2982850.5370218296218602No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT2867330.5162240148615077No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT2833670.5101639867725754No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTC2748350.4948032738626614No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA2743760.4939769063959888No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT2580110.4645139356071065No Hit
AAACGATGCCGACTGGCGATGCGGCGGCGTT2579460.46439691189178245No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC2444360.44007398275290077No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC2421350.43593134323043103No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGG2246530.404457364902827No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC2188120.39394143380732677No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA2072260.3730824066420356No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2069520.3725891066728237No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT1665610.2998705699704868No Hit
AACGATGCCGACTGGCGATGCGGCGGCGT1641270.29548848192281557No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT1536620.27664766375565075No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1530970.27563045761475746No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCT1504370.2708414871107289No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1497090.26953082149910007No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT1464500.26366343244923957No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA1463130.26341678246463357No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCGTT1436570.2586350134200096No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1413970.2545661888564365No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG1349840.24302044906608505No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1284530.23126226622329923No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT1277220.22994619951711695No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1219410.219538290312685No Hit
CGCTGAGAAGACGGTCGAACTTGACTATC1197770.21564230077482124No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC1181600.21273111081053017No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1179700.21238904148881388No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA1164210.20960027633440026No Hit
AACGATGCCGACTGGCGATGCGGCGGCG1090820.1963873986918945No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC1064970.19173345555170138No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1064190.19159302709331258No Hit
AAACGATGCCGACTGGCGATGCGGCGGCGT1054330.18981786735008999No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG1053440.18965763487833864No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGA1017510.18318892396819783No Hit
CTAAACTTTAAGGATGTCTTTTGTTCCTGGG992890.17875642570469477No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC992000.17859619323294343No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGGC988480.17796246480534267No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA974270.1754041463518748No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATA971220.17485503507227754No Hit
CGCCTGGATACCGCAGCTAGGAATAATGGAAT909810.16379899452143573No Hit
AAGCTACCATCTGTGGGATTATGACTGAAC909470.16373778211649703No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC905960.16310585405374742No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC897710.1616205530515581No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA890570.16033509254784517No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG888970.16004703417166302No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC884700.15927827838022685No Hit
CCGCCTGGATACCGCAGCTAGGAATAA883160.15900102219315151No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC877910.1580558306463038No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG866040.15591879756800234No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGC858490.15455952210539275No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCGT846930.1524783003374766No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT829840.14940147680688082No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG829660.14936907023956034No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC816530.1470051911900154No Hit
GGGCCGCCGGTGAAATACCACTACTCTCA807340.1453506558918191No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG804160.14477813986915705No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC802660.14450808514148628No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAT789400.14212080134887656No Hit
TAAACGATGCCGACTGGCGATGCGGCGG787560.14178953421626705No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC771340.13886934242772037No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGAT750780.1351677922937795No Hit
AGCTACCATCTGTGGGATTATGACTGAAC744970.134121780315268No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG724870.13050304696447954No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGA723910.13033021193877023No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCGTT718660.1293850203919225No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGGG699180.12587790966190462No Hit
GACCATAAACGATGCCGACTGGCGATGCGGCGGCG672440.12106373404996017No Hit
ACCATAAACGATGCCGACTGGCGATGCGGCGGCG670150.12065145049904943No Hit
CCATAAACGATGCCGACTGGCGATGCGGCGGCG666340.11996551149076565No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC665980.11990069835612466No Hit
ATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT658730.11859543383904922No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT643130.1157868646712731No Hit
GGGCGAAGCTACCATCTGTGGGATTATGACTGAAC630580.11352740678309421No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC623150.11218973569869829No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCA620600.11173064266165796No Hit
GACCCGCCGGGCAGCTTCCGGGAAACCAAAGT595010.10712350900759443No Hit
AGCCTCTGGCATGTTGGAACAATGTAGGTAAGGGA594990.10711990827789214No Hit
TGGCGCTAAACCATTCGTAGACGACCTGCTT581700.10472722339072901No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG581220.10464080587787437No Hit
ATAAACGATGCCGACTGGCGATGCGGCGG569160.10246956586740129No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCG565760.10185744181801419No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)