FastQCFastQC Report
Thu 22 Jun 2023
ERR1190992_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1190992_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78497711
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC46009385.861238425156117No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC41736905.316957586189997No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC40398425.146445607821609No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT30052473.828451762115713No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC24017973.059703231346453No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT10891801.3875309052005351No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT10696131.362604063703208No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC10159551.2942479303632177No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA8990231.1452856249528092No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC8816301.1231282909637965No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA7119720.9069971479805314No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC5658170.7208070054424899No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA5464340.6961145656845968No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT5283650.6730960600876629No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC5219940.6649798998597551No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA4834840.6159211445031817No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT4347710.5538645579104848No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCC4296690.5473650053311746No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA3984000.5075307227748336No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC3805550.4847975758172108No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC3563340.4539418990191956No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3291730.4193408900802216No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA2962770.3774339356213839No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT2937670.3742363901541027No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG2828900.36037993515505184No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC2676340.34094497354196734No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC2488410.3170041480572599No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCC2220800.2829127081170558No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA2112910.26916835829773433No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1970020.2509652797391761No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC1923410.24502752698100966No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1899990.24204400049321184No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1895630.24148857028455264No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC1818170.23162076662337325No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1765020.22484986855221806No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA1739270.22156951812263675No Hit
CCGCCTGGATACCGCAGCTAGGAATAA1725140.21976946563448202No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG1645160.2095806335040776No Hit
CGCCTGGATACCGCAGCTAGGAATAATGGAAT1619420.2063015569969932No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1582780.2016339049682608No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1571890.20024660336910968No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1486270.18933927895043973No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG1376190.1753159401042917No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC1316900.16776285362002466No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1253280.1596581586945892No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1243970.15847213684995223No Hit
TGGGGGGGCCCAAGTCCTTCTGATCGAGGCC1083940.13808555513166493No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC1055950.13451984606277245No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1030060.13122166071823418No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA1020410.1299923255087018No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG1011280.12882923426900944No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC983900.1253412344724294No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT980210.12487115707106415No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATA941140.11989394187557903No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG937230.11939583817928143No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAT892510.1136988567730338No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGC890770.11347719425856889No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT885530.11280965887018031No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT883160.11250773923840914No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT859680.10951656921562974No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGC841360.10718274320126353No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT823960.10496611805661442No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA821010.1045903109200216No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT814460.10375589168453588No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA810240.10321829639083362No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)