FastQCFastQC Report
Thu 22 Jun 2023
ERR1191001_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191001_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39413642
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT4469201.1339221074774057No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3670330.9312334039061907No Hit
TGCGCCGCGACCGGCTCCGGGACGGCCGGG2766350.701876269135443No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT2751730.6981668935847136No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC2661150.6751850032026983No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2559850.6494832423758251No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA2388450.6059957615690527No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT2193460.5565230434680459No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT2126480.539528927572844No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC2109100.5351192868702669No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC2101550.5332037064730024No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT2087140.5295476119664353No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1991020.5051601168955663No Hit
AGCTAGGAATAATGGAAT1847340.46870573391822046No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA1657860.4206310089283299No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1625400.41239528181638224No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1560210.3958553233928496No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG1527720.38761198470316444No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGG1484760.3767122053831006No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1424740.3614839755229928No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1401660.35562813505029556No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA1356640.3442056940589251No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAATG1321960.33540671019440427No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1299630.3297411591651439No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT1272780.32292879709010397No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACAC1212820.30771579038547114No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA1180780.29958662536184805No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA1064690.2701323567103999No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1057750.2683715450604641No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1055560.26781589988562843No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGA1049100.2661768734794922No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1047360.26573540197071865No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT999320.25354672882044244No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC956670.24272560247033248No Hit
AGGAATAATGGAAT942550.23914308654856103No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC929220.2357610088405431No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA924140.23447211501033072No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAAC922710.23410929647151107No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCG921250.23373886635495397No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC911720.23132092182701616No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCA909180.23067647491190996No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC906200.22992039152332078No Hit
TGCTGCAGTTAAAAAGCTCGTAGTTGGATCT884330.22437155135270168No Hit
CCGCCTGGATACCGCAGCTAGGAATAA864030.21922105041701045No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG853690.21659759329016082No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCCGGG842860.21384981372693243No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT838670.21278673003626514No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC825760.2095112144165718No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCC822790.20875766822056183No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT807040.20476158990838755No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA801950.203470158885596No Hit
AGCGGAGGAAAAGAAACTAACCAGGATTCCCT789680.20035702359096882No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG786260.19948930372889673No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAAT780700.19807862465488474No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGC763310.19366644675972852No Hit
AAGTCCTTCTGATCGAGGC754020.1913093948536905No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCA753170.19109373348446204No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC743360.1886047475643078No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG743070.18853116897951222No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAA722390.18328425472581295No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT719960.18266771692907752No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCT704330.17870208492785314No Hit
GCTGCAGTTAAAAAGCTCGTAGTTGGATCT701290.17793077838378904No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT698570.177240662002258No Hit
GCGACCTCAGATCAGACGTGGCGACCCGC675530.1713949702998774No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACA643800.16334445824620827No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAACA635620.16126903471645682No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA614500.15591048398927457No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAAC602470.1528582413165472No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACA597000.15147039697574763No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT591300.15002419720562743No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGC586920.1489129068559561No Hit
CAGCGGAGGAAAAGAAACTAACCAGGATTCCCT583670.14808831926772967No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC576760.14633511919553133No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC574920.1458682757609662No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC574850.1458505154129121No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT562510.14271961977023082No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA562380.14268663626670178No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT559450.1419432388410084No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT555380.14091060146129097No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAG548470.13915740138909263No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGATA546160.13857130990330707No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCT544750.13821356574964577No Hit
TGTCAAAGTGAAGAAATTCAATGAAGCGCGGGT541490.13738644096884017No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC536540.13613053064215683No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG536080.13601381978351557No Hit
AAGTCCTTCTGATCGAGGCC521540.13232474177341946No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA517220.1312286745792231No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACA508220.12894520125798067No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG497970.12634457886434347No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGGT492980.1250785197673435No Hit
AACCTCGGGCCGATCGCAC492060.12484509805006094No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAG488600.12396722941767219No Hit
CGCCTGGATACCGCAGCTAGGAATAATGGAAT482050.12230536827832353No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA480860.12200344236140369No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG478050.12129049124666023No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG476920.12100378848521536No Hit
AGCTAGGAATAATGGAA473040.12001935776450195No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAATGA472990.12000667180160617No Hit
TGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGG468500.1188674723335641No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCA467500.11861375307564827No Hit
TGCAGTTAAAAAGCTCGTAGTTGGATCT465930.11821541384072043No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA465070.11799721527891283No Hit
CGGAATGCCTAAAGGAAAGATCCAAAAAGAT460420.11681742072960422No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC458910.11643430465015134No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAATGATT452960.11492467506555218No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAATGAT445900.11313341710466646No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT445790.1131055079862957No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAA444120.11268179682557629No Hit
CGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACA432880.10982999236660242No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG430770.10929464473240001No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT424900.10780531268843412No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCC424500.10770382498526779No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC424390.10767591586689707No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATTTG421550.10695535317441611No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT418940.10629314591125581No Hit
ACCGCAGCTAGGAATAATGGAAT415660.1054609467452919No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAACA415650.10545840955271274No Hit
GGTGGAGCACGAGCGTACGCGTTAGGACCCGAAA414840.10525289695380091No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGC413300.10486216929661055No Hit
TAATCCACCTATAACTTCTCTGTTAACCCA411170.10432174727724984No Hit
ACTGACCCGGTGAGGCGGGG408410.10362148212540218No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA408020.10352253161481498No Hit
TTTCGCCGAATCCCGGGGCCGAGGAAGCCA407820.10347178776323182No Hit
GAATGCCTAAAGGAAAGATCCAAAAAGAT405470.10287554750712964No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTAA403710.10242900161319779No Hit
AACGATTAAAGTCCTACGTGATCTGAGTTC402160.10203573676342825No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCG401550.1018809680160996No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAG397730.10091176045086114No Hit
GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTC394850.10018104898806357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)