FastQCFastQC Report
Thu 22 Jun 2023
ERR1191002_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191002_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43109202
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG5226251.2123281706768776No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3654080.84763341246725No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG3123250.7244972894650196No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC2872820.6664052839577035No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2642660.6130152907956867No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2463610.5714812350272687No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2417660.5608222578557589No Hit
AGCTAGGAATAATGGAAT2343710.5436681476961693No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT2219100.514762486208861No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2061020.47809282111044415No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG1895760.43975761833865534No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG1839090.42661193310885226No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA1822670.42280300154941397No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1746160.40505505065948566No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1680630.3898541197770258No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT1636410.3795964490365653No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1482280.34384306162753836No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC1476210.3424350095833367No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1425640.33070433546879385No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT1350370.31324402618262337No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1323090.3069159108999513No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG1306990.3031812094318053No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1306790.3031348156247476No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG1266350.2937539878376779No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1229040.28509922313106145No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1220260.2830625350012278No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT1205940.27974073841589553No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1198280.27796385560558506No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1192410.27660219736844116No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1184830.27484387208095384No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1177660.27318065409793485No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC1129270.26195567248032103No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1102930.25584560809082013No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG1070100.24823006466229647No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1061030.24612610551222913No Hit
ACCGCAGCTAGGAATAATGGAAT1036830.2405124548582458No Hit
AAGTCCTTCTGATCGAGGCC1006420.23345827649512046No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1001320.23227523441514877No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC991830.23007384827026023No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC979870.22729949860820897No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC969230.22483134807273863No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT956510.22188070194386805No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG939650.2179697040089028No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG938850.21778412878067194No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG912930.21177149138599224No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG884460.20516733295132672No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC881860.20456421345957645No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT880890.2043392034953465No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG856120.19859333049124872No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA854780.19828249198396206No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG846620.19638962465600732No Hit
ACTGACCCGGTGAGGCGGGG831060.1927801864669172No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC818100.18977386776957736No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC803080.18628969285954308No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT801070.18582343509861307No Hit
AACCTCGGGCCGATCGCAC779180.18074563291614631No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC767210.17796896356374214No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG763430.17709212061035134No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC753020.17467732295299737No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC749720.1739118251365451No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT740560.1717869887733018No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC731330.16964591457758832No Hit
ATGTCTTTTGTTCCTGGGCAAGAAAATGCC719490.16689940119977167No Hit
GATGTCTTTTGTTCCTGGGCAAGAAAATGC707690.16416216658336658No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC697930.16189814879895018No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA691440.16039266975992736No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT642180.1489658750816125No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG622560.1444146426092508No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT621660.1442058704774911No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG619560.1437187355033851No Hit
AGCTCTTTCTCGATTCCGTGGGTGGTGGT595410.1381166833011662No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA593280.13762258925600152No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACG576760.1337904607930344No Hit
AAGTCCTTCTGATCGAGGC569550.13211796404860382No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG567950.1317468135921421No Hit
AGGAATAATGGAAT566840.1314893279629718No Hit
ACCGCAGCTAGGAATAATGGAA563150.13063336222275698No Hit
AACGATGCCGACTGGCGATGCGGCGGCG561610.13027612990841259No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC556540.12910004689949955No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG554760.1286871420166859No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA552330.1281234572609347No Hit
CTAAACTTTAAGGATGTCTTTTGTTCCTGGG548500.12723501585577948No Hit
AGCTAGGAATAATGGAATA545800.12660869946050035No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA538510.12491764519324668No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGGG531840.12337041172787193No Hit
ACCGCAGCTAGGAATAA531090.12319643495140549No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC530500.12305957322058525No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA526020.12202035194249247No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTA522960.12131052669450944No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT520000.12062389835005528No Hit
AGCTAGGAATAATGGAA514190.1192761582550287No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC510880.11850834074822354No Hit
AAGCTACCATCTGTGGGATTATGACTGAAC510810.11849210291575334No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGG498030.11552753864476546No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGG489290.11350012927634336No Hit
AACGATGCCGACTGGCGATGCGGCGGCGT483350.11212223320672927No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGC478380.11096934710134508No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA478340.11096006833993355No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC476180.11045901522371024No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGC474650.11010410259971873No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGG472500.10960536917384832No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTT470530.10914839017432984No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT468980.10878883816963256No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCA467620.1084733602816401No Hit
CAAGAAAATGCCGGTGGCAGAAGCTCCTCT465510.10798390561718121No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA461200.1069841190750875No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG445320.10330045079470504No Hit
TGGCGCTAAACCATTCGTAGACGACCTGCTT441870.10250015762295948No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA436540.10126376266487142No Hit
GGCGAAGCTACCATCTGTGGGATTATGACTGAAC435730.10107586774628767No Hit
ACGCCTGTCTGAGCGTCGCT434810.10086245623382219No Hit
CCTGGCGGAGCGCTGAGAAGACGGTCGAACT434390.10076502923900099No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT433080.10046114980277296No Hit
GATGTCTTTTGTTCCTGGGCAAGAAAATGCC432570.10034284559477581No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)