FastQCFastQC Report
Thu 22 Jun 2023
ERR1191003_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191003_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48048678
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT5113771.0642894274843524No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG4279770.8907154531910327No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC3965760.8253629787691558No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC3508490.7301949077558388No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3272380.6810551582709519No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT2712000.5644275998602917No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2592640.5395861255537562No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT2131000.44350856021470564No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT2130170.4433358187294977No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT1878160.3908869251303855No Hit
AGCTAGGAATAATGGAAT1871880.38957991726640223No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1701170.3540513643268187No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1674240.34844663155976946No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT1658100.3450875381004239No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1540990.3207143389043919No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1530460.31852281138723526No Hit
CGGCGACGACCCATTCGAACGTCTGCCCT1520630.316476969460013No Hit
AACGATGCCGACTGGCGATGCGGCGGCG1499500.3120793458667062No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG1438300.2993422628610094No Hit
AACTGTGGTAATTCTAGAGCTAATACATGC1422800.29611636765531824No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1410830.2936251440674393No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA1397130.29077386895015095No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT1394870.290303512616934No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1361580.2833751222041947No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1343960.2797080077832735No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1341400.2791752147686561No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG1340170.2789192243749141No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1211090.2520548015910032No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1170110.24352595091169832No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1150350.2394134548301204No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1144960.2382916757876252No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGC1113010.23164216921847466No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1110830.23118846266696452No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA1068910.22246397705260484No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATT1027270.213797765674219No Hit
TGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGG1004810.20912333946003675No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG994070.20688810626589976No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTT992460.20655302940905054No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA988390.20570597176471744No Hit
AACGATTAAAGTCCTACGTGATCTGAGTTC987710.2055644486202097No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT981330.2042366285290929No Hit
AGCTAGGAATAATGGAA965510.20094413419657456No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA952700.19827808790077428No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC950680.19785768091267777No Hit
TGCTGCAGTTAAAAAGCTCGTAGTTGGATCT947820.19726245121665992No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAAT945330.19674422676103595No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT943450.19635295689092633No Hit
AACCTCGGGCCGATCGCAC924770.1924652328623901No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC923470.19219467390965472No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT909780.1893454800150797No Hit
CCCGCCGGGCAGCTTCCGGGAAACCAAAGT890000.18522882148807507No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC854910.1779258109869329No Hit
GACCCGCCGGGCAGCTTCCGGGAAACCAAAGT853300.17759073413008364No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT839280.17467285988596815No Hit
ACCGCAGCTAGGAATAATGGAA837460.1742940773521386No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT836720.17414006687135078No Hit
CCGCCTGGATACCGCAGCTAGGAATAA834020.1735781367387465No Hit
TTAAAGCATCTGGCCTACACCCAGAAGATT833690.17350945638920595No Hit
ACCGCAGCTAGGAATAATGGAAT816200.16986939786355829No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGC806100.16776736292307565No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC804540.16744269217979318No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT745390.15513225983033288No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA735230.15301773755357015No Hit
CAACGATTAAAGTCCTACGTGATCTGAGTT718840.1496066135263909No Hit
AGCTCTTTCTCGATTCCGTGGGTGGTGGT712120.14820803186302026No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACA708240.14740051745024077No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG691020.14381665193785353No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT683560.14226405979369505No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT682510.1420455314087934No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTA676460.14078639166721715No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT675220.14052832005076185No Hit
GCTGCAGTTAAAAAGCTCGTAGTTGGATCT675220.14052832005076185No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA674710.14042217769238105No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG673870.14024735498445973No Hit
CGGAATGCCTAAAGGAAAGATCCAAAAAGAT670040.13945024668524697No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGATA663740.13813907637583703No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA660810.13752927812082572No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA641150.13343759426638127No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT638020.13278617155710298No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAAC635980.13236160212357975No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGGG631940.1315207881473867No Hit
GACCGGCGCAAGACGGACCAGAGCGAAAGC625090.13009515058874252No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG615630.12812631390191423No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA610490.12705656542725277No Hit
TTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGG602700.12543529293355377No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCA599390.12474640821543519No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT599090.12468397153403471No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA598390.12453828594410027No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA590650.12292741956396802No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC589340.12265477938851928No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG585320.12181812785775291No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCT572380.11912502566667911No Hit
ATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT565710.11773685011687521No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA563450.1172664937836583No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCT563290.11723319422024474No Hit
ACCGCAGCTAGGAATAA562110.11698760994006951No Hit
AGGAATAATGGAAT557320.11599070426037528No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT556300.11577841954361368No Hit
AGTTAAAAAGCTCGTAGTTGGATCTTGG549730.11441105622094327No Hit
AACTGTGGTAATTCTAGAGCTAATACATG542060.11281475839980447No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAG538250.11202181254601844No Hit
AACCTCGGGCCGATCGCA537210.11180536538383011No Hit
CAGGTCGGTTTCTATCTATTTACGATTTCTC536880.1117366850342896No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATT535630.11147653219512096No Hit
GCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGG532520.11082927193126937No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT529420.11018409289013113No Hit
GACCGGCGCAAGACGGACCAGAGCGAAAG524550.10917053742873009No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGC523100.10886876013529445No Hit
CCGGGGCTACGCCTGTCTGAGCGTCGCT523030.10885419157630101No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT521580.10855241428286538No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAG517690.10774281864737256No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCT517460.10769495052496553No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG517190.1076387575117051No Hit
TTGCTGCAGTTAAAAAGCTCGTAGTTGGATCT513020.1067708876402385No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT508830.10589885532334521No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT506840.10548469200338872No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT505780.10526408239577371No Hit
CGTTTACTTTGAAAAAATTAGAGTGTTCAAAGC499850.10402991732675766No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAAC497750.10359286055695435No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGG495320.10308712343761049No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG488230.10161153653384596No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCA485860.10111828675078219No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG482990.10052097583205098No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA481700.10025249810202894No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)