FastQCFastQC Report
Thu 22 Jun 2023
ERR1191004_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191004_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55458988
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC10133771.8272547634659329No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT7932741.43037950854783No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT7645961.3786692249054382No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT6685101.205413268630145No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5970401.0765432647274416No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC5885361.0612094111778598No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC4703320.8480717318534553No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG4318150.7786204104553801No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC3783380.6821942008750682No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC3706430.6683190829230422No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA2990850.5392904032075018No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2799250.5047423512307869No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC2677730.48283066398543006No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA2428430.43787852746249173No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2255700.4067329897905818No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC2231830.40242890836738676No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC2192080.39526144977618416No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT2145770.38691113512565356No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT2140560.3859717021882909No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA1887300.3403055245075875No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1866590.33657123350321505No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC1667810.3007285311444919No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA1646670.2969167053679378No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1642320.2961323419749383No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG1592620.28717076481813913No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1574060.2838241476746745No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA1556220.28060735619625804No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA1551400.27973824549412984No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA1544950.2785752239114064No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA1524310.2748535548466914No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT1506600.27166020411335307No Hit
AGCTAGGAATAATGGAAT1435700.2588759823745792No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1405170.25337101354968833No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1391900.25097825441748056No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG1340230.2416614598160356No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1334730.24066973598580632No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG1290750.23273955161244556No Hit
TAAGTCAGAATCCCGCCCAGGCGGAACGATAC1276440.23015926651961263No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC1273160.22956783848994866No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCG1243010.2241313887660554No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1236020.2228709979345458No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGA1215290.21913310066169978No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1170430.21104424047550235No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1152960.2078941649638468No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1116560.2013307563419657No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCC1116190.20126404037520482No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA1101480.19861162991290068No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACA1100580.1984493478315904No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1070290.19298765422838227No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1060060.19114304790415576No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCG1046720.18873766683229057No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAAC1036040.18681191946740897No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACA1035520.18671815648709636No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTAA1030790.18586527399309918No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAA1019060.18375019753335564No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA993710.17917925224311704No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAG985710.17773674485369262No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGG976710.17611392404059015No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC958110.17276009436017836No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC949590.17122382399044137No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTAATA947770.17089565355934733No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA947640.17087221281426918No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAAG938360.16919890424253684No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG931860.1680268669886295No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC930100.16770951536295614No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC924720.16673942914356824No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG917170.16537806279479894No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAATG890240.16052222229514898No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATC886150.15978474039230575No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC885220.15961704890828518No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAAC885200.1596134426398116No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG883510.1593087129537957No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAACA871480.15713954246694872No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA870670.1569934885937695No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCAGT861480.15533640823016823No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCA843680.1521268292886989No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC838230.1511441211296535No Hit
AGGAATAATGGAAT835030.15056711817388374No Hit
ATCGTTTTTTCACTGACCCGGTGAGGCGGGG819190.1477109535428234No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACAC811160.14626303675068864No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT803000.14479167921347574No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT800520.14434450192275416No Hit
CGCAGTTTTATCCGGTAAAGCGAATGATTAGAGGT795790.143491619428757No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG791800.14277216886828153No Hit
CTAAGTCAGAATCCCGCCCAGGCGGAACGATAC791750.14276315319709765No Hit
TTGAAAGTCAGCCCTCGACACAAGGGTTTGT787320.14196436473020388No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAACA785070.14155865952692825No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTA780230.1406859425563265No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGAG767470.13838514327019455No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG766400.13819220790685902No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC753020.1357796142980467No Hit
ACTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAA749790.1351972019395666No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAACA732180.1320218825485961No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCA714250.12878886286204863No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT701020.126403316266788No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGATA698720.12598859539232846No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA696600.12560633093413098No Hit
ACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGC695720.12544765512129433No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAG682330.1230332583782452No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTT663550.1196469722815714No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAG663400.11961992526801969No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT662070.11938010841452786No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT653070.1177572876014254No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATG651170.1174146920964371No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT638010.11504176744083394No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAAC637560.11496062640017882No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACA637490.11494800446052135No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA635370.11456574000232388No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACA633880.11429707300104358No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG632230.1139995558519748No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGGT626360.11294111605498464No Hit
TGTCAAAGTGAAGAAATTCAATGAAGCGCGGGT619610.11172400044515778No Hit
AGCTAGGAATAA615150.11091980257555366No Hit
CCGCCTGGATACCGCAGCTAGGAATAA611330.11023100529710352No Hit
GACTCTTAGCGGTGGATCACTCGGCTCGTGCGT610770.11013002977984379No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCC607580.10955482995831081No Hit
GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTC606870.1094268074274994No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGT604740.10904273983506514No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC600070.10820067614648865No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT594100.10712420500713067No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAG567560.10233868674271518No Hit
AGTTTTATCCGGTAAAGCGAATGATTAGAGGT564150.10172381796797303No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATA563450.10159759857139838No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGAT562860.10149121365142834No Hit
ATTGAAAGTCAGCCCTCGACACAAGGGTTTGT557800.10057882772761739No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)