FastQCFastQC Report
Thu 22 Jun 2023
ERR1191005_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191005_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47426381
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG5118531.0792579766944477No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC4897541.0326615475888832No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT3405040.7179632787076881No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC3320730.700186252878962No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC3019410.6366519933283545No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2894880.6103944553559758No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2824500.595554613370141No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2488160.5246362778555673No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1853460.39080780800036163No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1783610.37607971816361024No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG1768260.37284312290242005No Hit
AGCTAGGAATAATGGAAT1718610.362374265917528No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1706910.3599072845132333No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC1661350.35030081675428704No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA1621080.3418097619550604No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT1529130.32242181835464107No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1505720.3174857470149367No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1486790.3134942976146546No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1477950.31163035610918743No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1428960.301300662177871No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA1423560.3001620553758888No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1273980.2686226469609815No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1271400.2680786459333678No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1201410.2533210366610094No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1193630.25168059945370913No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC1151110.24271512515365656No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG1144940.24141416145583616No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1141750.24074154003022072No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG1123370.23686605984125164No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT1105000.23299268818339736No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA1098510.23162425148990387No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1079790.22767708124303224No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT1078720.22745146841375058No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA1008660.21267909942358876No Hit
AGCTAGGAATAATGGAATA996590.210134102368047No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC980610.20676466964662554No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT967820.20406785835081956No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT910010.19187843997626552No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC857570.18082130281034936No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT857070.18071587625461027No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT856890.1806779226945442No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG854410.1801550069780783No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC823530.17364386289563186No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA816470.17215523992859585No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT786040.1657389797463146No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT768740.16209122091774197No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC740940.15622950441864836No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA734890.15495384309420532No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG721610.15215371377377496No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT708080.14930087117547508No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC689270.14533472414857038No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG620030.13073525470982067No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGAC616160.12991925316840008No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC592590.12494944533085921No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA590050.12441387842770461No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT585640.1234840162060858No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCG576980.12165802826068471No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC576530.12156314436051951No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAA576160.1214851287092726No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCA571400.12048146789863641No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG563770.11887265865805784No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATC561590.11841299887503538No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGAG552700.11653851471399432No Hit
TTGAAAGTCAGCCCTCGACACAAGGGTTTGT552680.11653429765176473No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT552530.11650266968504303No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC548260.11560232689903115No Hit
AACTGTGGTAATTCTAGAGCTAATACATGC548170.11558335011899812No Hit
ATCGTTTTTTCACTGACCCGGTGAGGCGGGG543890.11468089880187149No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC539520.11375947070471179No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC537950.11342843131969105No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA534980.11280219757860083No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCAGT532920.11236784016895576No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT525950.1108981939819528No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT525540.11081174420624675No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA525430.11078855036398413No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG525260.11075270533503284No Hit
TGAAAGTCAGCCCTCGACACAAGGGTTTGT514950.10857880975569273No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA505950.10668113175238904No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG503630.10619195253375965No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAAC490870.10350146683129798No Hit
ATTAAATCAGTTATGGTTCCTTTGGTCGCTC489210.10315145066624416No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCA484850.10223213110019927No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC484050.10206344861101671No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA479600.10112515226493879No Hit
TAAGTCAGAATCCCGCCCAGGCGGAACGATAC479340.10107033045595447No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAAC479080.10101550864697013No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCC477090.10059591095512854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)