FastQCFastQC Report
Fri 23 Jun 2023
ERR1191006_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191006_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53368431
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG6097951.1426136923530692No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC4121310.7722374300267512No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC4065670.7618117909443506No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT3761330.7047855688318811No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC3670460.6877586489286148No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC3553440.6658318285579728No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3346600.6270748338095231No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG3276150.6138741459347006No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA2829330.5301504929009436No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2744040.5141691349329719No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2692060.504429294539313No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC2542330.476373382608906No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT2528070.4737013909964863No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA2450260.459121610676544No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG2367930.4436948877136747No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC2352880.4408748685154337No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2063880.3867230048415701No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG1996690.3741331649791241No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1993940.37361787907911326No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1976490.370348155822681No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1974500.3699752762077641No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT1923610.36043967640720037No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1785550.33457045045974837No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1747640.3274670001072357No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1695770.3177477711495772No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1657380.31055437998542623No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG1597340.2993042834630083No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1522280.2852397890430768No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1501700.2813835767440868No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT1418510.2657957098270324No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA1401450.26259906348005624No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA1372100.257099557601759No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC1315730.2465371335349919No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1308960.24526859333751072No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1286270.2410170162206942No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1248620.2339622838078189No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1189980.22297451465267926No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG1188480.2226934496163097No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1182080.22149423879446634No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG1180020.22110824281118552No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG1170240.21927569877405614No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACG1164480.21819640903439713No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1148710.21524147861869874No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG1142180.2140179088270367No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1113970.2087320123763803No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA1107100.20744473450980788No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTG1057010.19805903606197453No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1054600.19760745823687417No Hit
GGGCGAAGCTACCATCTGTGGGATTATGACTGAAC1018120.19077195655236706No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC992690.1860069673024489No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT976020.1828833978649288No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGGT975450.1827765931511084No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATTTG962570.18036318137214866No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT959860.17985539053977434No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC923420.1730273839229038No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG916820.1717906977628778No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC901350.16889198035445338No Hit
AGCTAGGAATAATGGAAT899140.16847787786753557No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG880360.164958943612189No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC859770.16110085754628986No Hit
AACGATGCCGACTGGCGATGCGGCGGCG859410.16103340193756116No Hit
TTGAAAGTCAGCCCTCGACACAAGGGTTTGT859080.1609715676295599No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA855330.16026890503863606No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG835780.15660569073128644No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT823500.1543047049668745No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC791660.14833863112820386No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG786110.14729869049363659No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT786000.14727807905763615No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT784930.14707758599835924No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG784600.1470157516903579No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG783300.146772161992171No Hit
AAGCTACCATCTGTGGGATTATGACTGAAC774390.14510263567613596No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA751720.14085480609313772No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA744770.13955253809129223No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG741320.1389060885076423No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATT740870.1388217689967314No Hit
GGCGAAGCTACCATCTGTGGGATTATGACTGAAC731850.13713163124469596No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG726210.13607482670794652No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA724260.1357094421606661No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG722590.13539652308684136No Hit
TAAGTGGGAGGCCCCCGGCGCCCGGCCCCG717240.13439405779045668No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC715620.1340905075511776No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA715580.13408301248354104No Hit
TGAAAGTCAGCCCTCGACACAAGGGTTTGT714350.13385253915371803No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT712570.13351900864389288No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG703870.13188883143294958No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC702610.13165273680239917No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG693440.12993449254672673No Hit
TGGCGCTAAACCATTCGTAGACGACCTGCTT678630.12715944375430488No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC665150.12463360596079731No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGAT659410.12355806375495657No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC650720.12192976031092238No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG647710.12136575647127418No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT646290.1210996815701777No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC645290.12091230487926467No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA638060.1195575714039635No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTCC634350.11886240388067619No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG630750.11818784779338931No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA620510.11626911047843996No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC618690.11592808490097825No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG616200.11546151694060483No Hit
AGCTCTTTCTCGATTCCGTGGGTGGTGGT609030.11411802606675846No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG607360.1138051069929337No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGA607290.1137919906245698No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA604740.11331418006274158No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT597910.11203439726380565No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATT597600.1119763104896226No Hit
TTAAAGCATCTGGCCTACACCCAGAAGATT596160.11170648805470784No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC595290.11154347033361352No Hit
AACGATTAAAGTCCTACGTGATCTGAGTTC592610.11104130080196661No Hit
ACCGCAGCTAGGAATAATGGAAT590180.11058597544304798No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT588440.11025994000085931No Hit
CAACGATTAAAGTCCTACGTGATCTGAGTT586320.10986270141612371No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC581600.10897828343501423No Hit
GAGCCTCGGTTGGCCCCGGATAGCCGGGTCCC576180.10796270177026565No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC569540.10671852054260317No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCAGT564820.1058341025614937No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGT561740.1052569823534816No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG559970.10492532561056553No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAACA552110.10345254481998918No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG550490.10314899458071008No Hit
CCTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA548040.10268992168797318No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAG546860.10246881719269581No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA545240.10216526695341671No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAAT542070.10157128284322244No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT534090.1000760168497365No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)