FastQCFastQC Report
Fri 23 Jun 2023
ERR1191007_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191007_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63008359
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC61

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACGATGCCGACTGGCGATGCGGCGGCG9456921.5008992695715182No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG9390281.4903228950939669No Hit
AAGTCCTTCTGATCGAGGCC7547941.1979267703194745No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC7342351.1652977662852637No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6867121.0898744403103722No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT6449801.0236419583630165No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6189200.9822823666936No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5882240.9335650211109291No Hit
AGCTAGGAATAATGGAAT5423550.8607667436633288No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA4666300.7405842770798078No Hit
ACTGACCCGGTGAGGCGGGG4508450.7155320455179606No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT4430740.7031987612945133No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG4159360.6601282855184342No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC4153090.6591331794563956No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3999010.634679281204578No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC3934170.624388583108473No Hit
ACCGCAGCTAGGAATAATGGAAT3600960.5715051236297076No Hit
AACCTCGGGCCGATCGCAC3388340.5377603946168475No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG3347860.5313358502163181No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT3304440.5244447010594261No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT3135200.4975847728394259No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT3119090.49502796922548004No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT3094310.49109515770756706No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC2961290.46998367311867306No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG2955700.46909648924518094No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA2942620.4670205742066699No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT2919060.4632813877917373No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT2854170.4529827542405921No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA2756060.43741180436075155No Hit
AAGTCCTTCTGATCGAGGC2717720.4313268974359418No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT2593280.41157713693194264No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT2569290.4077697056036644No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC2458870.39024504669293164No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG2457760.39006887959103964No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC2429240.3855424960361212No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT2389770.3792782478274033No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT2258870.358503226532213No Hit
ACCGCAGCTAGGAATAATGGAA2186730.34705395200024175No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT2131100.3382249647225378No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG1982900.3147042759834453No Hit
ACGCCTGTCTGAGCGTCGCT1979300.3141329232205524No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1918400.30446753898161355No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1899180.30141715006416847No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG1893830.3005680563748692No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1884220.2990428619161467No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG1807940.28693653170684863No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1761420.27955338433746546No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG1734070.2752126904304872No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG1629350.25859267339433484No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1619900.25709287239174095No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1616200.25650564871876763No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG1593590.25291723594959836No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1561980.2479004412731968No Hit
AACGATGCCGACTGGCGATGCGGCGGCG1560350.24764174543888692No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG1546290.2454102954815884No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG1429110.22681276304942333No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT1419440.22527804604465257No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1400390.22225463767434414No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA1329380.21098470442628098No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1315920.2088484799294646No Hit
AGTGAGGCCCTCGGATCGGCC1307560.20752167184674655No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT1306720.20738835620207155No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC1305880.20725504055739652No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1293890.20535211843876144No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC1278960.2029825915637638No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA1245970.19774677832825321No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT1237520.19640568642646286No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1206000.1914031755691336No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC1192800.1893082154385262No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1126990.1788635695146417No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT1107870.175829051507277No Hit
GATGCCGACTGGCGATGCGGCGGCG1067210.16937593946860288No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA1040600.16515269029621926No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT1035250.16430359660692004No Hit
AACGATGCCGACTGGCGATGCGGCGGCGT1032080.16380048875737266No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT1021130.1620626241035733No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG1003960.1593375888427756No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGA1003770.15930743411362291No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC991010.1572823059873691No Hit
GGGGCTACGCCTGTCTGAGCGTCGCT986430.15655541830568862No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC984730.1562856128343225No Hit
ACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGC961580.1526114971507193No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA954860.15154497199331918No Hit
ACCGCAGCTAGGAATAA949280.1506593752108351No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGGG946210.1501721382713681No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACG943910.14980710733951982No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC941630.14944525058968763No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA941090.1493595476752537No Hit
AGCTAGGAATAATGGAA926210.1469979562552962No Hit
GCAGCTAGGAATAATGGAAT921530.1462551976635354No Hit
CCTGGCGGAGCGCTGAGAAGACGGTCGAACT916330.1454299103393567No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG915500.14529818178568973No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG901020.1430000740060537No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT869790.1380435887879575No Hit
AGCTAGGAATAATGGAATA866530.13752619711933778No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG856350.13591053847315718No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA852170.13524713443179817No Hit
AAACGATGCCGACTGGCGATGCGGCGGCGTT823780.13074138305998417No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC821350.13035571994503142No Hit
CGAAGCCGAGCGCACGGGGTCGGCGGCGAT819260.13002401792435192No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC815010.12934950424593664No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA813000.12903049895332142No Hit
CGCAGCTAGGAATAATGGAAT796350.1263879924249416No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC791660.12564364674217274No Hit
AAGCTACCATCTGTGGGATTATGACTGAAC757300.12019040203856127No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGG734480.11656866035822326No Hit
AGATAACCTCGGGCCGATCGCAC732220.11620997779040715No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT719730.11422770112137026No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGC716690.11374522545492734No Hit
GGCGAAGCTACCATCTGTGGGATTATGACTGAAC707570.11229779845559856No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTA691690.10977749793483751No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA690830.10964100810814642No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC686530.10895855897469096No Hit
ACGTTGAACGCACGTTCGTG685860.10885222387715256No Hit
GACCCGCCGGGCAGCTTCCGGGAAACCAAAGT679010.10776506653664794No Hit
AGTGAGGCCCTCGGATCGGC675140.10715086231653803No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT665520.10562408076680747No Hit
TGTCAAAGTGAAGAAATTCAATGAAGCGCGGGT659980.10474483234835556No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAAG648760.10296411623733925No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCAGT638420.10132306413503009No Hit
CCTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA637720.10121196776446757No Hit
GGGCGAAGCTACCATCTGTGGGATTATGACTGAAC637240.10113578739608185No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGC634320.10067235682173535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)