FastQCFastQC Report
Fri 23 Jun 2023
ERR1191008_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191008_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54398154
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG8359121.5366550857589762No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6890691.2667139403296663No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6857861.2606788090639987No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC6396891.1759388011585834No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT6234991.1461767618070275No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG6218721.1431858514904751No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5791601.0646684812135354No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC4621210.8495159596776023No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT4496530.8265960642708575No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG4442430.8166508738513443No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3538540.6504889853431424No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA3188200.5860860646116778No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC3186900.5858470859139816No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG2979430.5477079240593349No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG2914090.5356964870535864No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG2883070.5299940876670189No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA2869130.5274315007086454No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT2813840.5172675528658565No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT2796780.5141314170330118No Hit
AGCTAGGAATAATGGAAT2784470.5118684725955958No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT2667980.49045414298433726No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT2550780.4689092942381831No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA2443500.4491880367852188No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC2441370.4487964793805319No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT2331560.4286101326158972No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC2321920.4268380136575958No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT2320680.4266100647459471No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT2314020.4253857584946725No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG2237930.4113981514887436No Hit
AACGATGCCGACTGGCGATGCGGCGGCG2230630.4100561941862954No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT2216080.40738147106977196No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC2126680.39094708985896837No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT2092390.38464356713281117No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2015080.37043168781058267No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1909550.35103213245067105No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG1874700.34462566505473696No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1766270.3246930033691952No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1716510.3155456341404526No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1715800.315415115005557No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1519060.2792484465557416No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC1468740.26999813265722217No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC1412460.2596521933446492No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1402470.2578157339677372No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG1401360.25761168292585807No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA1400720.25749403187468456No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG1395130.2564664234745907No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG1381290.25392221949296295No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1359540.2499239220507372No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1356330.24933382849719496No Hit
CTAAACTTTAAGGATGTCTTTTGTTCCTGGG1327300.24399725034787026No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG1321910.24300640790126815No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA1283400.23592712355643541No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG1179220.21677573838259293No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGC1170350.21514516834523467No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT1140950.20974057318195027No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG1140550.2096670412749668No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT1131520.20800705847481515No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC1114950.20496099922802527No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC1095890.20145720386026333No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1088230.20004906784153006No Hit
AACCTCGGGCCGATCGCAC1081200.19875674457629575No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT1074830.1975857489575841No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1071980.19706183412032696No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC1045210.1921407112454588No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1036520.19054323056624312No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1027870.18895310307772575No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT979660.1800906699885441No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT950910.1748055641741078No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGG940630.17291579416463287No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGGG937280.1722999644436464No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC933430.17159221983893055No Hit
AAGTCCTTCTGATCGAGGCC931670.17126867944820331No Hit
ACTGACCCGGTGAGGCGGGG929050.17078704545746168No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG913390.16790827129905916No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT884940.16267831441486047No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGC869740.15988410194948896No Hit
ACCGCAGCTAGGAATAATGGAAT865540.1591120169261626No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC856010.15736011924228163No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGG854560.1570935660794666No Hit
CTAAACTTTAAGGATGTCTTTTGTTCCTGG843360.15503467268392968No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG831260.15281033249767997No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA824430.15155477518593738No Hit
AACGATGCCGACTGGCGATGCGGCGGCGT821270.15097387312076804No Hit
CCTGGCGGAGCGCTGAGAAGACGGTCGAACT805080.14799766918561244No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC801610.1473597798925309No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGGC791450.145492069455151No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGG786730.14462439295274615No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG775250.14251402722232082No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA773410.1421757804501969No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACG767570.14110221460823835No Hit
AGCTAGGAATAATGGAA757420.13923634246853303No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC748000.13750466605907252No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTT740540.13613329599383098No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC722800.13287215591911447No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG696840.12809993515588783No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGG696330.1280061819744839No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC693130.1274179267186162No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC693040.12740138203954496No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA689990.12684070124879607No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGA671920.1235188973508182No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA665350.12231113577861484No Hit
CGCTGAGAAGACGGTCGAACTTGACTATC660210.12136625077387736No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA660140.12135338269015526No Hit
CCGCCTGGATACCGCAGCTAGGAATAA657890.1209397657133733No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG654740.12036070194587853No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA653950.1202154764295862No Hit
AAACTTTAAGGATGTCTTTTGTTCCTGGG647070.11895072762947065No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT646210.11879263402945622No Hit
CGAAGCCGAGCGCACGGGGTCGGCGGCGAT642750.11815658303404929No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCA626390.11514912803842572No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA626000.11507743442911685No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTT603710.11097986891246348No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT600190.11033278813100901No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACA588270.10814153730290185No Hit
ACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGC584570.10746136716330486No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG583590.10728121399119536No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA581180.10683818425162No Hit
CCCGCCGGGCAGCTTCCGGGAAACCAAAGT569090.10461568236304489No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGGG559470.10284724000009265No Hit
TGTCAAAGTGAAGAAATTCAATGAAGCGCGGGT549020.10092621893014973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)