FastQCFastQC Report
Fri 23 Jun 2023
ERR1191009_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191009_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60588893
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG7964521.314518157643184No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG6377781.0526318742941878No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT6293471.0387167826287897No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5644570.9316179452230625No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC5029090.8300349702708713No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG4678900.7722372481702215No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC4603920.7598620427014569No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3580030.5908723237442215No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG3153300.520441923241608No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT2956100.4878947037372015No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2894540.47773442568095775No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT2791910.46079567751798994No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2768140.45687251622174385No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA2722360.4493166759128608No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT2535300.41844303047424886No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC2492750.41142029117448964No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG2474350.408383430936756No Hit
ACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGC2466660.4071142214134858No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT2459980.40601170910978684No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC2349070.3877063738398389No Hit
AACGATGCCGACTGGCGATGCGGCGGCG2262710.37345293633273674No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG2113820.3488791254199016No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT2085700.34423801075223476No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC1988300.32816245710249237No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG1967220.3246832715692627No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1944310.3209020504797802No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT1897530.31318116341884644No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1857200.30652482790863994No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1806640.2981800641249544No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1804710.29786152389349646No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1800460.29716007519728077No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC1752510.2892460834364477No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1703590.28117199632612533No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1689710.278881147407661No Hit
CTGGGCAAGAAAATGCCGGTGGCAGAAGCT1651850.2726324773750199No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1595410.2633172386892759No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1589050.2622675413462332No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1570430.25919437082304836No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG1533230.25305463164676073No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1500330.2476245935042913No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1486850.24539976328664725No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1480540.24435831828120708No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG1450440.2393904110444797No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG1407120.23224058574564155No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT1367450.22569318109178857No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGC1365090.22530367075694882No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCTTT1333700.22012285321007596No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1217230.20089985799872592No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG1201270.1982657118359961No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1195200.19726387805104806No Hit
CTAAACTTTAAGGATGTCTTTTGTTCCTGGG1176600.19419400846290424No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG1100400.18161744595663762No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT1060390.1750139254070874No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATC1046540.17272802789118463No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1024310.1690590385930966No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT1021420.16858205347966995No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC1019330.1682371057678839No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGC1011850.16700255606254433No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC989010.16323288824570537No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT979830.16171775906187955No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC975530.16100805802806137No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG957890.15809663332188625No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGT952350.15718227431552512No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC950200.15682742379861603No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA935200.1543517225178549No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC929850.15346872239438342No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT916650.1512901052673136No Hit
AAACTTTAAGGATGTCTTTTGTTCCTGGG907280.14974361720059812No Hit
ATGATTAAGAGGGACGGCCGGGGGCATTCGT899740.14849916469013555No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG899640.14848266001493046No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT895570.14781091973408395No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT863260.14247825917532445No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA859990.1419385562961185No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC854650.14105720664016752No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA854400.14101594495215486No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT851010.14045643646270284No Hit
AACTGTGGTAATTCTAGAGCTAATACATGC849390.14018906072438062No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC847000.13979459898697935No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG844330.13935392415900386No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA840960.13879771660459286No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGG824370.13605959098807102No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGGG820730.13545882081060634No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC817010.13484484689297754No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGGC813770.13431009541633315No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC806360.13308709898363716No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT804100.13271409332400247No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA804050.13270584098639993No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG797660.1316511922407957No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG792790.13084741455830856No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG783600.12933063490696223No Hit
GACCCGCCGGGCAGCTTCCGGGAAACCAAAGT782140.12908966664896815No Hit
AGTGAAACTGCGAATGGCTCATTAAATCAGTT744930.12294827700516No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT741120.12231944887984667No Hit
CTAAACTTTAAGGATGTCTTTTGTTCCTGG736370.12153547680760564No Hit
CCTGGCGGAGCGCTGAGAAGACGGTCGAACT734230.12118227675821705No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA732660.1209231533574974No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC711370.11740930800633706No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA711080.11736144444824234No Hit
ATTAAATCAGTTATGGTTCCTTTGGTCGCT708360.11691251728266434No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG707380.11675077146565462No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGG699870.11551127035775352No Hit
ATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT695030.11471244407782794No Hit
CAACGATTAAAGTCCTACGTGATCTGAGTT689270.11376177478601565No Hit
GGGGCTACGCCTGTCTGAGCGTCGCT688690.11366604766982621No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA688440.11362478598181353No Hit
CCCGCCGGGCAGCTTCCGGGAAACCAAAGT685600.11315605320598941No Hit
ATTAAATCAGTTATGGTTCCTTTGGTCGCTC683400.11279295035147778No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA680730.1123522755235023No Hit
ACTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAA659450.1088400806398625No Hit
ACCGCAGCTAGGAATAATGGAAT656380.1083333871110667No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTT652510.10769465618063034No Hit
AACGATTAAAGTCCTACGTGATCTGAGTTC646570.10671427847344893No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT640690.10574380357139056No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACA638000.10529982780837406No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA624080.1030023770198277No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGC623010.10282577699513341No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGG607970.10034347384429024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)