FastQCFastQC Report
Thu 22 Jun 2023
ERR1191010_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191010_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51322850
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC4480360.8729756823714973No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG4026490.7845413884848561No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT3705360.7219708180664167No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3418120.6660035442302991No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC3156350.6149989721926978No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC3073790.5989125701320173No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC3059240.5960775755828057No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2994910.583543197620553No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2806310.5467954332232134No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT2429520.4733797908728763No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC2389520.46558599142487217No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC2232120.4349173905969758No Hit
ACTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAA2064970.4023490511536285No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1944010.3787806016228639No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTC1900160.3702366489779893No Hit
ACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGC1808460.35236936374343986No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1759510.3428317016689447No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1710640.33330962719334567No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG1701140.3314585998244447No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1654270.32232621532124583No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG1632270.3180396256248435No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1594310.3106433099486876No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATC1593660.3105166607076575No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1540920.30024053613546403No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1521250.296407935256908No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1451380.2827941160711067No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1410050.27474117279145643No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT1385690.26999474892762193No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1344800.26202753744189966No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA1339770.2610474671613131No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT1284280.2502355188770694No Hit
ATTAAATCAGTTATGGTTCCTTTGGTCGCTC1264790.24643799009602935No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG1214810.23669963768574814No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1208260.23542340302613748No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG1180290.2299735887621206No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA1164230.2268443782837469No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1124130.21903109433712276No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1110390.21635392422673333No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1088900.21216670547329308No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1074280.20931807177504758No Hit
AAAGGTTTGGTCCTGGCCTTATAATTAATTAGAGGT1059960.20652789157266208No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA1057030.20595699576309578No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1045550.20372017532151857No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC1021810.1990945553491281No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1007760.19635698329301668No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1005360.1958893553261364No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCC981040.19115072526174987No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG959700.18699273325623966No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT941060.18336082271346973No Hit
ATGATTAAGAGGGACGGCCGGGGGCATTCGT914270.17814092553316896No Hit
AGTTTTATCCGGTAAAGCGAATGATTAGAGGT887540.17293271905204016No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT886420.17271449266749606No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTCC881820.1718182057309756No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCTTT865910.16871822200053194No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT860650.16769333737311937No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGAAA853970.16639177286530268No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC842970.16424847801710155No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC814210.15864473621398656No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA806960.1572321100640358No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA803160.15649169911647542No Hit
AGCTAGGAATAATGGAAT798550.15559346373009295No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG791620.15424318797572623No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT788400.15361578712016186No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA786730.1532903959932077No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA782360.15243892340351325No Hit
CATGATTAAGAGGGACGGCCGGGGGCATTCGT772040.15042812314592818No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT771160.1502566595580721No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG767240.14949286721216767No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT763490.14876219851391728No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAACA762410.14855176592882116No Hit
ATTAAATCAGTTATGGTTCCTTTGGTCGCT755240.14715472737776644No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC754870.1470826347328724No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG751160.14635975983407No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA729830.1422037162784218No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAAC729290.14209849998587373No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAAC727250.14170101621402553No Hit
AAAGGTTTGGTCCTGGCCTTATAATTAATTAGAGG704810.1373286947236952No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG698490.13609727441091055No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC691190.13467490601164978No Hit
AACTTCGGGATAAGGATTGGCTCTAAGGGCTG689050.13425793774118155No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC688580.1341663605976675No Hit
AGGAGGGCCGCTGCGGTGAGCCTTGAAGCCT684330.13333826940631707No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG673030.1311365210622559No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA671680.13087348033088575No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATC670320.13060849114965362No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC669020.1303551926675935No Hit
CGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCG668990.13034934731800749No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACA668170.1301895744293234No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC664130.12940240068507497No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGA651150.1268733127641976No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCA649170.12648751969152142No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATG647570.12617576771360126No Hit
ATCGTTTTTTCACTGACCCGGTGAGGCGGGG645860.12584258278719906No Hit
ACGGACCAAGGAGTCTAACGCGTGCGCGAGTC639730.12464818302179244No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAG629190.12259451686724335No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT626140.12200023965933302No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAACA625420.12185995126926893No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAG620810.12096171588288646No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG618150.12044342821959421No Hit
ATGAGAGGTGTAGAATAAGTGGGAGGCCC616890.12019792353698205No Hit
CAACGATTAAAGTCCTACGTGATCTGAGTT614480.11972834712023982No Hit
GGGCGAAGCTACCATCTGTGGGATTATGACTGAAC608140.11849302990773115No Hit
CAACGATTAAAGTCCTACGTGATCTGAGTTC606350.11814425738243296No Hit
AGCTAGGAATAA601770.11725186734563649No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTG597280.11637701335759804No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT590560.11506765505033333No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG583890.11376803899237865No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAGAG581400.11328287497674037No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT576230.11227552639808584No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCT567540.11058232346800694No Hit
AGTGAAACTGCGAATGGCTCATTAAATCAGTT565800.11024329319201877No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAAC562020.10950677914418237No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGT555070.10815260649009165No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT552170.10758755603011134No Hit
TAAGTCAGAATCCCGCCCAGGCGGAACGATAC548610.10689390787923898No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA545000.10619051747905661No Hit
AGCTAGGAATAATGGAA542160.1056371577182483No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG541440.10549686932818424No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA534770.10419725327022954No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG531840.10362635746066325No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG528650.1030048019546849No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA526160.10251963793904664No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGATA525260.10234427745146656No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA524850.1022643910071245No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGTG520990.10151228936039211No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG515990.10053806442939159No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)