FastQCFastQC Report
Thu 22 Jun 2023
ERR1191011_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191011_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51075405
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATT4769220.9337605839836218No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG4216480.825540198849133No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC3738440.7319452484028272No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2920960.5718916962087721No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2394730.4688616761824992No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG2348410.4597927319421158No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG2161980.4232917976861857No Hit
CTCGCCCGTCACGTTGAACGCACGTTCG2048450.4010638780054705No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1899260.37185412430895065No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1899200.3718423769718517No Hit
AACGATGCCGACTGGCGATGCGGCGGCG1758740.34434186082322793No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1731850.3390770959133853No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1667870.3265505187868799No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1657480.3245162715792464No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC1646350.3223371405473926No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC1525490.29867408785108995No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1506020.29486207696248323No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1495370.29277692462742094No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCC1482210.29020034202371964No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1469320.28767662243696357No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC1433660.28069478842115886No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT1330460.2604893686109782No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG1318670.25818101687103606No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA1277250.2500714384937329No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG1252540.24523349349848522No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1225820.24000201271042296No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1218760.23861974271178074No Hit
CCCCGGGGGGGGATGCGTGCATTTATCAGA1205740.23607057056131028No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1091570.21371734595153966No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT1067600.20902428478051224No Hit
GACTGCATAATTTGTGGTAGTGGGGG1032840.20221866082119172No Hit
TCGACTGCATAATTTGTGGTAGTGGGG1026300.200938201077407No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1008360.1974257472848233No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1006180.1969989273702284No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC992420.19430487139553762No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG973300.19056138664000805No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC957530.1874737948725027No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT920640.18025114044616974No Hit
CGAAGCCGAGCGCACGGGGTCGGCGGCGAT883120.17290513898029786No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACA870690.17047148231130033No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAA862380.1688444761230968No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAAG847890.16600749421370228No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC842480.164948275985281No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC783710.15344175929686707No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC767100.15018970480997654No Hit
CGACTGCATAATTTGTGGTAGTGGGGG762900.1493673912130506No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC747080.14627000999796283No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG742470.14536742293086075No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT736920.14428079424920862No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG731890.14329597582241393No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT726510.14224263126254214No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT725460.14203705286331061No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCA725100.14196656884071696No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG715920.1401692262645788No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT670650.1313058604234269No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAAGA662340.1296788542352234No Hit
CCGACGTACGCAGTTTTATCCGGTAAAG646410.12655993623545422No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC644080.12610374797811197No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGG637950.12490356170450337No Hit
AGCTACCATCTGTGGGATTATGACTGAAC634230.12417522680436895No Hit
CCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGC619550.1213010449941611No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGC618550.12110525604251204No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC614880.12038671058996009No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA614700.12035146857866325No Hit
CAACTTCTTAGAGGGACAAGTGGCGTT612350.119891364542288No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC609510.11933532391960476No Hit
CCCGGGGGGGGATGCGTGCATTTATCAGA604670.11838770539362341No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA593180.11613809033917596No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG587900.11510432467446904No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA581980.11394525408070676No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC562470.11012541163403404No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT559350.10951455010488903No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA556130.10888410968057914No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT555570.10877446786765567No Hit
GAGCCTCGGTTGGCCCCGGATAGCCGGGTCCC551460.10796977527637813No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCGT531660.10409315403372718No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGAT531160.10399525955790266No Hit
TACCCGTCGCCGCGCTCTCTCTCTCCCC528050.10338635591827416No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGC527040.10318860907710865No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)