FastQCFastQC Report
Thu 22 Jun 2023
ERR1191020_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191020_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50038369
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length1-49
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG6747791.3485231702895832No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC4134430.826251950778012No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3380340.6755495967504456No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC3257670.6510344092150565No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2930940.5857385159776092No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA2912910.5821352810280447No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG2729950.5455713394655209No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA2668490.5332887648676159No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG2556170.5108419900736573No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG2527310.5050744159946541No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2430950.48581719360197373No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT2426010.4848299511920543No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT2418210.48327114738691823No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC2405500.4807310965711133No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT2360130.47166405443790543No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2251140.44988276896075485No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC2210590.4417789876404644No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2097460.4191703370667417No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT2061130.41190990857435816No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT2042160.40811881778161074No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT1861880.3720904652188004No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1779720.35567106513803437No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1619100.3235716975507335No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1610740.3219009796262544No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT1578410.3154399377006073No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1560140.31178873955703873No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG1463250.2924255984442658No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG1423320.2844457220418195No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA1412370.28225740131537863No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT1389060.2775989760977221No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACG1382410.27626999593052287No Hit
GGGCGAAGCTACCATCTGTGGGATTATGACTGAAC1351980.27018866262407554No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC1350150.2698229432697936No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1301560.260112394950363No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTG1280750.2559535863369168No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG1273070.2544187641287829No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1260720.25195065810398415No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1253530.2505137607502754No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1228970.24560552723051385No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1227120.24523581094339827No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1211460.2421062125346252No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1195600.2389366447975153No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG1166800.23318106151701307No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1163360.23249358906961975No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1131620.22615045666256628No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG1094600.21875213398742074No Hit
AAGCTACCATCTGTGGGATTATGACTGAAC1088290.21749110167839403No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG1050260.20989093389514754No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1050150.2098689507645623No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG1010620.2019690130187896No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG966980.19324770557569532No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC934980.18685261304180398No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT924720.18480218649812508No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG908990.1816585988244341No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA906460.1811529868209733No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGGT893130.1784890310873242No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT881410.1761468284467865No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA867940.17345489418330162No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC863020.1724716487062158No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG853330.17053513474829685No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATG852930.1704551960916232No Hit
GGCGAAGCTACCATCTGTGGGATTATGACTGAAC843010.16847271740611688No Hit
TGAAAGTCAGCCCTCGACACAAGGGTTTGT837230.16731760381718278No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT831850.1662424288849223No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG831540.1661804764260002No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG811430.16216156046173288No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC802230.1603229713582391No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC789410.1577609374118489No Hit
TCAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG775620.15500505222302507No Hit
AGCTAGGAATAATGGAAT774920.15486515957384622No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC770230.15392787882434777No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG769330.1537480168468321No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA751140.1501128064345982No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA751040.15009282177042982No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA750760.15003686471075825No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG747820.149449315584207No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT743760.1486379382189695No Hit
TTGAAAGTCAGCCCTCGACACAAGGGTTTGT738420.14757075715237641No Hit
TAAGTGGGAGGCCCCCGGCGCCCGGCCCCG733380.1465635300782885No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA728730.14563424319445742No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG717010.14329204055391973No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT709740.1418391554688763No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCA708290.14154937783843435No Hit
AGCCTCTGGCATGTTGGAACAATGTAGGTAAGGGA700940.14008050502205618No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAG689550.1378042517732742No Hit
TGGCGCTAAACCATTCGTAGACGACCTGCTT682810.13645728540832336No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC676920.13528018868880398No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT675450.13498641412552836No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC674350.13476658281967585No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCAGT673780.13465267023391592No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC666670.1332317606115419No Hit
AGCTACCATCTGTGGGATTATGACTGAAC664950.13288802438784525No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATTTG657350.13136918991104607No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA646970.12929478177036505No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT644130.1287272173079822No Hit
AAAGGTTTGGTCCTGGCCTTATAATTAATTAGAGGT642110.12832352709178033No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGA638440.12759008991679965No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT636340.12717041196926301No Hit
AGTGAGGCCCTCGGATCGGCCCCGCCGGGG635990.1271004656446736No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC633780.12665880456655174No Hit
AGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA620520.1240088380978205No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA620300.12396487183664999No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGAT603910.12068938537944751No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA593490.11860698337309915No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG586670.11724402927681356No Hit
TGTCAAAGTGAAGAAATTCAATGAAGCGCGGGT574570.11482588491243591No Hit
CGAAGCTACCATCTGTGGGATTATGACTGAAC572750.11446216402457082No Hit
AACGATGCCGACTGGCGATGCGGCGGCG564710.11285539702543061No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC557210.11135654721279983No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC555790.11107276498160841No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG552590.11043325572821928No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC549710.10985769740016904No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG547460.10940804245637983No Hit
CGACGTACGCAGTTTTATCCGGTAAAGCG540090.10793517270716796No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTC538740.10766537974089443No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGGGTCGG537810.10747952236412821No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAGT537460.1074095760395388No Hit
CCTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA529640.10584677530156908No Hit
GAGCCTCGGTTGGCCCCGGATAGCCGGGTCCC527790.10547705901445348No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAAGA523890.10469765711188547No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG522950.10450980126870243No Hit
AGCCTCTGGCATGTTGGAACAATGTAGGTAAGGG516080.10313685484033262No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC507930.10150810471060717No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA506620.101246305610001No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG501080.10013915521507105No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGA500500.10002324416289428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)