FastQCFastQC Report
Thu 22 Jun 2023
ERR1191022_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191022_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63170089
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT24589843.892639758668062No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT20289563.2118935276472382No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT13482512.1343186646452246No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC11848931.8757184274348577No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT10197691.6143225633258171No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC9654621.5283530786223842No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT9317011.474908480815976No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT9201751.456662503673218No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTC8809901.3946315636819826No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA8772961.3887838593990267No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC7791161.2333622008985932No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCG7495221.1865140794720108No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA7303751.1562038483118173No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCAT7139911.1302675226561736No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT6403281.013656954005558No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT6057620.9589380189095507No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCG5894180.9330650143614647No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5568090.8814440644527191No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC5104550.8080643989594506No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGA4946250.7830050706434813No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT4917010.7783762976810117No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT4815830.7623592235242853No Hit
AAACGATGCCGACTGGCGATGCGGCGGCGTT4433560.7018448240590575No Hit
AACGATGCCGACTGGCGATGCGGCGGCGT4267070.6754889960658438No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT4122640.6526253271544386No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA4036880.6390492816940625No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC4001550.6334564448690265No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG3832940.6067650150057569No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT3822970.6051867363998806No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT3625750.5739662643185448No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG3453320.5466701178780989No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCT3422820.5418418834268224No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2984800.47250210459573677No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCT2518420.3986728592388084No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC2436580.38571736063249806No Hit
AAACGATGCCGACTGGCGATGCGGCGGCGT2389810.3783135401313112No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT2383040.3772418303858967No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTA2325120.3680729340115383No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA2294230.36318296148039303No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT2285040.36172815903425437No Hit
TGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT2265190.35858584907170227No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCGTT2184480.3458092325942425No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT2165160.3427508230992044No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCG2104930.33321624732870014No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACT1948250.30841336949833964No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1862190.2947898332072953No Hit
GAAGCTACCATCTGTGGGATTATGACTGAAC1771540.2804396872070261No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTTA1742810.2758916486566926No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC1695220.26835801988501234No Hit
AAACGATGCCGACTGGCGATGCGGCGGCGTTA1694810.26829311574976566No Hit
CGGGCCGCCGGTGAAATACCACTACTCTCA1665270.26361685195662776No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1644420.2603162392251814No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1566980.24805727280200604No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTC1541470.24401896916751217No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1477930.23396041123196773No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1467890.23237105143226883No Hit
CGCTGAGAAGACGGTCGAACTTGACTATC1460250.23116161827791631No Hit
CCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTG1454510.230252960384463No Hit
AAGCTACCATCTGTGGGATTATGACTGAAC1396800.22111730759157233No Hit
CGCGTCTCTCGGGGTCGGGGGTGCGTGGCGG1362670.2157144340892095No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTTC1356080.214671218842196No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCGT1349460.2136232545121157No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGTG1324010.2095944490437555No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT1322590.2093696591119256No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA1320130.2089802343004456No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG1289680.20415991498761382No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGC1285320.20346971491523466No Hit
GGGCGAAGCTACCATCTGTGGGATTATGACTGAAC1261640.19972110534781737No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1257220.19902140710930452No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC1249300.19776764917966158No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC1218000.1928127725132697No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT1195330.18922404874243567No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCGTT1192970.18885045420784513No Hit
CCGACGTACGCAGTTTTATCCGGTAAAGCG1184620.18752862608757762No Hit
TGGCGCTAAACCATTCGTAGACGACCTGCTT1166690.18469025744130263No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1150960.18220015488659513No Hit
CATAAACGATGCCGACTGGCGATGCGGCGGCGTT1018610.16124878342343318No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1009570.15981772639262865No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGA1007970.15956444196239775No Hit
AGCTACCATCTGTGGGATTATGACTGAAC998900.15812863584852635No Hit
GACCATAAACGATGCCGACTGGCGATGCGGCGGCG998160.15801149179954455No Hit
TAAACTTTAAGGATGTCTTTTGTTCCTGGG991990.15703476371546665No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA967850.153213334874358No Hit
AACGATGCCGACTGGCGATGCGGCGGCG955280.15122346906935655No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGAT947690.15002195105344873No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC930340.14727539801313244No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT930280.14726589984699878No Hit
AGCCTCTGGCATGTTGGAACAATGTAGGTAAGGGA916090.14501958355638853No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATG906220.1434571352274017No Hit
TAAACGATGCCGACTGGCGATGCGGCGGCGTTA905160.1432893342923737No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAATACATG896040.14184561304005763No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG888690.14068208768868445No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAG877240.1388695209848446No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCGT875520.13859724022234637No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGC857950.13581586057287334No Hit
TCTAAGTCAGAATCCCGCCCAGGCGGAACGA856090.1355214174227299No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT853010.13503384489453546No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAG852900.13501643158995708No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC819870.129787691133378No Hit
TAGTGAGGCCCTCGGATCGGCCCCGCCGGGG819640.12975128149653234No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG815380.12907691170104257No Hit
CCTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA815150.12904050206419687No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC807010.1277519175253972No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACA789410.12496578879285733No Hit
AGCCTCTGGCATGTTGGAACAATGTAGGTAAGGG775340.12273846883451439No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT766890.12140081043735745No Hit
CGAAGCTACCATCTGTGGGATTATGACTGAAC765580.12119343381010592No Hit
GGCGAAGCTACCATCTGTGGGATTATGACTGAAC763230.12082142230320429No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC754680.11946793362915793No Hit
GGGGCGAAGCTACCATCTGTGGGATTATGACTGAAC731320.11576998094778686No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT722850.11442915649525205No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACA702370.11118711578829657No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGGGTCGG700830.11094332952419933No Hit
GGGCCGCCGGTGAAATACCACTACTCTCA688360.1089692939960873No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT678470.10740367961172258No Hit
ATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT675820.10698417727415266No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATA653620.10346985580469896No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC648770.10270208737556157No Hit
TGGCGCTAGACCATTCGTAGACGACCTGCTT644810.1020752084107401No Hit
ATAAACGATGCCGACTGGCGATGCGGCGGCGTTA640510.10139450650449455No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA639910.10129952484315796No Hit
CATCGTTTTTTCACTGACCCGGTGAGGCGGGG638260.10103832527448237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)