FastQCFastQC Report
Thu 22 Jun 2023
ERR1191024_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191024_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38540171
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC3556800.9228812191829663No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC3146470.816413087528854No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2892870.750611615085984No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT2568560.6664630522786211No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC2492920.6468367771383267No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2394010.6211726460684359No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT2283940.5926128350598133No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC2035870.5282462291098813No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA1804890.4683139574030432No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1470860.38164335077807515No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1210020.31396331894842916No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC995780.2583745671496891No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC995770.2583719724544035No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG921940.23921533716080295No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC903580.23445147661643745No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC844080.21901303966710473No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC832440.2159928143546639No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG817950.2122331008858264No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG809180.20995755312035333No Hit
ATGTACACGGAGTCGACCCGCAACGCGA799540.20745626686503285No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA770640.1999575974896427No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA742110.1925549318398198No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA729610.18931156273281716No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT724160.187897453802164No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT672670.17453736777659862No Hit
GAGGTGGAGCACGAGCGTACGCGTTAGGACCCGA644030.1671061604786341No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCC630120.16349693933636153No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT626110.16245646652683507No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT623600.16180519801014895No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA603770.1566599172587999No Hit
ACGGTGGCCATGGAAGTCGGAATCCGCT588190.1526173820038318No Hit
ACGTACGCAGTTTTATCCGGTAAAGCGAATG562760.14601907189254557No Hit
ATTCCCCATGAACGAGGAATTCCCAGTAAGTGC553020.1434918386843691No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT535340.13890441741942453No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTC503550.13065588110649534No Hit
GGTCGGTTTCTATCTATTTACGATTTCTC498410.12932220772969585No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT497190.1290056549048524No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT493430.128030049477466No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT492190.12770830726205135No Hit
TAATCCACCTATAACTTCTCTGTTAACCCAA491110.1274280801712063No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC484860.12580639561770496No Hit
CCGCCTGGATACCGCAGCTAGGAATAA478540.12416654819720442No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAG470360.12204408745358188No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCG465160.12069484590506876No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC439820.11411988805135297No Hit
CAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG431600.111987048526588No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA428480.11117750359748015No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT421140.1092729972578482No Hit
CGCGGCGTGGGAAATGTGGCGTACGGAA420400.10908098980671362No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCCGGG407800.10581167374685493No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT405220.10514224236316959No Hit
GGAATGCCTAAAGGAAAGATCCAAAAAGAT400720.10397462948464863No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC399810.10373851221365885No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT397230.10306908082997347No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCC396820.1029626983232638No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA395010.10249305847656982No Hit
TAATCCACCTATAACTTCTCTGTTAACCCA388350.10076499141635879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)