FastQCFastQC Report
Thu 22 Jun 2023
ERR1191026_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191026_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52888637
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC11334342.143057685528935No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC10915042.0637778961859046No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC10703162.0237163608508193No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC7871361.4882894410759726No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT5858311.1076689308518197No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC4917510.9297857307232175No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3250860.6146613307504976No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG2474230.4678188246749486No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1928080.3645546774064153No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1900440.3593286020965146No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT1776360.3358679861611862No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC1740860.32915576931959883No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1624450.3071453703751148No Hit
AGGTCGGTTTCTATCTATTTACGATTTCTC1581220.2989715919508381No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC1496480.282949246735173No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1477820.2794210786713978No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1467420.27745468275160884No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1389550.2627312933021889No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCC1315880.24880202528191456No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1249410.2362341082830325No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC1171160.221438869751928No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1115100.21083923943814245No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1076870.2036108436676105No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1054380.19935851249106687No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT984850.18621202130809308No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC976850.18469940906210158No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCC947500.17915001288462018No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC945670.17880400283334963No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA930030.1758468458924362No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC906520.17140165665452864No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC905440.1711974540013198No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG888730.168037985172505No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC857350.1621047636376033No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC845160.15979992072777371No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG811420.1534204785803045No Hit
AACGATGCCGACTGGCGATGCGGCGGCG798150.15091143301726606No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA787020.14880701123003037No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT750690.1419378608679214No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC748950.14160886770441825No Hit
CTCGCCCGTCACGTTGAACGCACGTTCG745720.14099815051009917No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAAT737840.13950822744779753No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG723520.13680065152747273No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT702420.1328111367286701No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT687270.12994662728782364No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA686250.12975376922645976No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC684460.12941532223641913No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCC680980.12875733590941282No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT629070.11894237319823539No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT606440.11466357130738689No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG605890.11455957921547497No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC605790.11454067156240007No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC604950.11438184727657096No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG601040.1136425580413426No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC591550.11184822176453517No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGC585670.11073645176373141No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTG585160.11064002273304945No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT574740.1086698452826455No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC571000.10796269905764447No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGA568550.10749946155730956No Hit
CAACTTCTTAGAGGGACAAGTGGCGTT547990.10361204808511136No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG541570.10239817675770316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)