FastQCFastQC Report
Thu 22 Jun 2023
ERR1191027_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1191027_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47240129
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTCGGTTTCTATCTATTTACGATTTCTC3384580.7164629038163719No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC2231680.47241191911224456No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2226110.4712328368112627No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2066510.43744800104165676No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1721320.36437665104597833No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATA1559760.3301769137844649No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGT1548740.32784415131465877No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC1530010.323879301853727No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1477650.3127955048556281No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC1383700.292907752220575No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1139140.2411382068833893No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGAT1109580.23488081499523425No Hit
GGATGGTTTAGTGAGGCCCTCGGATCGGCC1089520.23063442523622238No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG1054380.22319583420273895No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAAT1042950.2207762811147277No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGA1034850.2190616371940898No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1022890.21652989135571582No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCT1015750.21501846449233872No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC1011070.2140277813381924No Hit
TGCCCTCGGCCGATCGAAAGGGAGTCGGGTT1009520.21369967046449007No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG996920.2110324465879422No Hit
TAGCTCTTTCTCGATTCCGTGGGTGGTGGT995960.2108292295306814No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG963210.20389656429600353No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC924340.19566839032128808No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCT871930.18457400910145694No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT868240.1837928935376108No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT847900.17948723213689785No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC841740.17818325601947446No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTATC800530.16945974046768586No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC799090.16915491488179468No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATT784280.16601986840467772No Hit
TGACCCGCCGGGCAGCTTCCGGGAAACCAAAGT764490.16183063344302043No Hit
CTCGCCCGTCACGTTGAACGCACGTTCG748580.15846273408779218No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT728800.15427561597048137No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATG719960.15240432556820493No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGT716250.15161897631566584No Hit
TTAAAGCATCTGGCCTACACCCAGAAGATT702940.1488014564905189No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCCC700610.1483082317577922No Hit
GGGCCGCCGGTGAAATACCACTACTCTCAT697260.1475990889017259No Hit
AACGATTAAAGTCCTACGTGATCTGAGTT688190.14567911107948076No Hit
CCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGC682410.1444555750472231No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCC650350.13766897207245138No Hit
GACGTACGCAGTTTTATCCGGTAAAGCGAATG646620.13687938913121933No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC641120.13571512474066275No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTG636030.1346376509683113No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCT625080.13231970640893043No Hit
TGGAATGAGTCCACTTTAAATCCTTTAACGA605430.12816010726812369No Hit
CAACTTCTTAGAGGGACAAGTGGCGTTC603370.12772403733275156No Hit
CTCGCCCGTCACGTTGAACGCACGTTCGT575010.12172066676617246No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT570200.12070246463552206No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAA569960.12065166037120685No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC568700.12038493798355208No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG567680.12016901986021249No Hit
GGTCGGTTTCTATCTATTTACGATTTCTC565390.11968426250487166No Hit
TCGACTGCATAATTTGTGGTAGTGGGG561700.1189031469410255No Hit
CGTCGCGGCGTGGGAAATGTGGCGTACGGAAG559340.11840357167525939No Hit
GCTGAGAAGACGGTCGAACTTGACTATCT555560.11760340451229503No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT549290.11627614310706053No Hit
AGCTACCATCTGTGGGATTATGACTGAAC548370.1160813934271856No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT547970.11599671965332695No Hit
ACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGC542150.11476471624368341No Hit
GGCCGCCGGTGAAATACCACTACTCTCAT540400.11439426848305179No Hit
AGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGA537880.11386082370774221No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT537100.11369570984871781No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT537070.1136893593156784No Hit
ATAATCCACCTATAACTTCTCTGTTAACCCAA535130.1132786915124639No Hit
CGGCGACGACCCATTCGAACGTCTGCCCTAT533730.1129823333039586No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC532110.11263940451983101No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA527940.11175668042735447No Hit
CAACTTCTTAGAGGGACAAGTGGCGTT526550.11146243906319561No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA526440.11143915377538449No Hit
AATAATCCACCTATAACTTCTCTGTTAACCCAA520800.11024525356397735No Hit
GGGCCGCCGGTGAAATACCACTACTCTCA514490.10890952478135697No Hit
TGCCAAGAATGTTTTCATTAATCAAGAACGAA512480.1084840390677172No Hit
ATCCAGGTCGGTTTCTATCTATTTACGATTTCTC492470.10424823353043765No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT488610.10343113161270157No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGC486350.10295272479040013No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC485610.10279607830876161No Hit
AACGATGCCGACTGGCGATGCGGCGGCG484250.10250818747764216No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG482850.10221182926913683No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC476320.10082952991089418No Hit
GACGTACGCAGTTTTATCCGGTAAAGCG474700.10048660112676662No Hit
ATTAAATCAGTTATGGTTCCTTTGGTCGCT473840.10030455251297049No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)