FastQCFastQC Report
Thu 22 Jun 2023
ERR1802070_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1802070_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32991341
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length1-76
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC22732796.890532276332751No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT14280964.328699460867626No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC13343034.044403651248975No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT11092643.3622883046797036No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6235611.890074732033475No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC6173731.871318295306638No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC5838051.7695703851504552No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC5685911.7234552545166322No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5088591.542401686551632No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT3424181.037902642393348No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACA2912900.8829286448222883No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA2166290.6566238092595266No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC1869030.5665213790491268No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1734880.5258591943867937No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC1727190.5235282797386138No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATG1699600.5151654793298641No Hit
CCCCCCGAGTGTTACAGCCCCCCGGC1657870.5025167058229006No Hit
GTGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTC1656740.5021741917068482No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGG1499650.4545586673788131No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1488170.45107896644759No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTT1478590.44817517420707453No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1401460.42479631246271565No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACAC1384090.41953129459029864No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1349450.4090315698291864No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1060750.32152375982534326No Hit
TGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTC996540.30206107717779646No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGG945370.28655094680752746No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC918770.2784882251376202No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC877620.26601525533624115No Hit
CGTGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTC852330.2583496075530849No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCTT822810.24940180515851113No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC794660.2408692632409213No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCT787570.23872021449507008No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC778500.23597100827153403No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT763850.23153044915634075No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG700480.21232237877205415No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG636510.19293244248543884No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC631300.191353240233551No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACAT629930.19093797975656704No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC617760.18724913303766585No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT601770.18240240674060507No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC599980.181859840131991No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCTTGG585950.17760720911587075No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC539880.16364293891539602No Hit
GCATTTATCAGTTGGTGACTCTAGATAACCT521090.15794750507413446No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA486410.14743565591953356No Hit
CGGGGCTACGCCTGTCTGAGCGTCGCTT485340.14711132839371396No Hit
CCGGGGAGGTAGTGACGAAAAATAACAATACAGGA459440.1392607836098569No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC459430.13925775251148476No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGC453440.13744212458656954No Hit
AGCGGAGGAAAAGAAACTAACCAGGATTCCCT407260.12344451230400122No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG403960.12244424984119318No Hit
CCCGGGGAGGTAGTGACGAAAAATAACAATACAGGA399470.12108328667209982No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC379310.1149725923538543No Hit
CAGCCGACTTAGAACTGGTGCGGACCAG371490.11260227342683646No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT360180.1091741011679398No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC354010.10730391347232597No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA351830.10664313402719823No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC346000.10487600367623734No Hit
CGGGGAAGGTGGCTCGGGGGGC334770.10147208020431786No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)