FastQCFastQC Report
Thu 22 Jun 2023
ERR1802072_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1802072_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37859333
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length1-76
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC403725610.66383287840808No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC30239787.9874043211485No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC25115946.634015448713796No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC18632974.9216318734405595No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC18551884.900213112576495No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT15933394.20857652193714No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC11616763.0684005975488264No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT10240262.7048178582543967No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT5554011.467012110329572No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC5436041.4358520262361727No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC3532990.9331886539047056No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC3451820.9117487621876487No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC3332540.8802426603765047No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACA2739160.7235098410212351No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT2586030.6830627470378308No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACA2226270.58803730113259No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATG2218450.5859717602526172No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1979570.5228750332183613No Hit
GTGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTC1832710.48408406983820873No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1571270.41502844226019514No Hit
GCCGCCTGGATACCGCAGCTAGGAATAA1562400.41268555893470177No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1500070.39622198309727225No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1480080.3909419112058841No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT1479770.39086002915053997No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1466450.38734174212736394No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACAC1367470.3611975942629523No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1173940.31007941951856366No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT1172670.30974396722731484No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1073880.2836500051387593No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA979450.2587076745382704No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG948800.2506119164856919No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT947940.25038475981602737No Hit
TGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTC882160.23300991594331577No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTT867820.2292222105444911No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACAT794170.20976861900868668No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC775040.2047157037869632No Hit
CGTGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTC766680.2025075296492941No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC711830.18801968856662107No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCC688070.18174382522798274No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC677120.17885153972469614No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGC669760.17690750124942772No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA646260.17070031318301354No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGC619500.16363204285717342No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCTT612550.1617963000034892No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCC597320.15777351386512806No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC592090.1563920843507729No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGC574090.15163764242756206No Hit
CTCTAAGTCAGAATCCCGCCCAGGCGGAACGATAC537770.14204423516917217No Hit
CTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGG533780.14099033387619375No Hit
CCCGGGGAGGTAGTGACGAAAAATAACAATACAGGA514800.1359770390038303No Hit
CCGGGGAGGTAGTGACGAAAAATAACAATACAGGA465630.12298948848359267No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC457710.12089753403737989No Hit
CTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC450590.11901688812108761No Hit
GAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAA447690.11825089470012586No Hit
CCCCCCGAGTGTTACAGCCCCCCGGC430550.11372360944657953No Hit
GGTGACTCTAGATAACCTCGGGCCGATCGCAC407440.10761943428850158No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC405590.10713078331306047No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)