FastQCFastQC Report
Thu 22 Jun 2023
ERR1802075_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1802075_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30830839
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length1-76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGTCGCTGGTTCAAGTTCAACTAGAATGTGGCT497798416.146119150374076No Hit
CGGTCGCTGGTTCAAGTTCAACTAGAATGTGGCT350342711.363385213097834No Hit
GAGGACACTGCGATCCATTACGAAACAGCT30071659.753756620116631No Hit
CAGTACGATGTACACATTTTTGAGTGCCTATA27471968.910545703929756No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGCGGCGC10712763.4746897416576954No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGCGGCGCA7169512.325434607861304No Hit
CAGTACGATGTACACATTTTTGAGTGCCTA4981481.6157458446070834No Hit
CAGTACGATGTACACATTTTTGAGTGCC4354521.4123910153726276No Hit
AGTACGATGTACACATTTTTGAGTGCCTATA3615291.172621348384324No Hit
CCGGTCGCTGGTTCAAGTTCAACTAGAATGTGGCTT3607961.1702438587545412No Hit
CCAGTACGATGTACACATTTTTGAGTGCCTATA2779850.9016459136905097No Hit
TTCGCGCCGCAAGGCGCAAGGTCGCCCGACAAC1804220.5851997735124885No Hit
TGGAGTTGAAATCTGGATAATTTTGCTGATCGTAT1639630.5318149142811196No Hit
CGGTCGCTGGTTCAAGTTCAACTAGAATG1615710.5240564488043936No Hit
ATCTTGCATGGAATAATGGAATATGACCT1325000.4297644965159722No Hit
AGTACGATGTACACATTTTTGAGTGCCTA1306220.42367319293516464No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1284060.4164855844500372No Hit
AGGACACTGCGATCCATTACGAAACAGCT1233460.40007344594157823No Hit
CCGGTCGCTGGTTCAAGTTCAACTAGAATGTGGC1204400.3906478185689335No Hit
TTTCGATCCTCTCAGACTACCCTTGCTTGGAGGT1193660.3871642935179286No Hit
CGGTCGCTGGTTCAAGTTCAACTAGAATGTGGC1170710.37972044808770855No Hit
TTCGCGCCGCAAGGCGCAAGGTCGCCCGACAA1156120.3749881733675817No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGCGGCG1153520.37414486190272017No Hit
CAGTACGATGTACACATTTTTGAGTGCCT958030.31073757026203536No Hit
GCAGTCGGGCGCGTGATGGATTCCCCCGGACACCGG952040.30879471038721973No Hit
CCGGTCGCTGGTTCAAGTTCAACTAGAATG948080.30751028215612297No Hit
TGCCCGGTTCCGTGTACTGGAGAGTTCGTTATCTGCC830490.2693698994049432No Hit
GAGGACACTGCGATCCATTACGAAACAGCTT761750.24707404167625796No Hit
AGAGGACACTGCGATCCATTACGAAACAGCT754700.2447873702042296No Hit
CGCTGGAGTTGAAATCTGGATAATTTTGCTGA742820.24093408551093926No Hit
TCGCTGGTTCAAGTTCAACTAGAATGTGGCT731550.2372786546613279No Hit
CAGTACGATGTACACATTTTTGAGTGCCTAT686240.2225823306332987No Hit
AATCTTGCATGGAATAATGGAATATGACCT594180.19272261776593233No Hit
CAGTACGATGTACACATTTTTGAGTGC592680.19223609192081992No Hit
GAATAATCTTGCATGGAATAATGGAAT590820.1916327998728805No Hit
TTTCGATCCTCTCAGACTACCCTTGCTTGGAGG578740.1877146450669085No Hit
TGGAGTTGAAATCTGGATAATTTTGCTGATCGTA572570.1857134020906794No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGCG560370.18175632521709836No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGCGG481010.1560158645050172No Hit
CGCTGGTTCAAGTTCAACTAGAATGTGGCT475020.1540730046302016No Hit
CATTTCGATCCTCTCAGACTACCCTTGCT467420.15160794034829866No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGCGGC460820.14946722662980402No Hit
CTCCCAGAGAGGGTGATAGGCCCGTAGAGC436140.14146225472488763No Hit
AACGGTCGCTGGTTCAAGTTCAACTAGAATGTGGCT434570.14095302434033666No Hit
CGGTCGCTGGTTCAAGTTCAACTAGAATGTGGCTT432470.14027188815717925No Hit
GCAGTCGGGCGCGTGATGGATTCCCCCGGA431580.13998321615574588No Hit
TAATCTTGCATGGAATAATGGAATATGACCT415200.13467035392711824No Hit
AGCGAAACGGGAAGAGCTCAGCACGCAGGGGCG414520.1344497955440006No Hit
GCTTAAATGCGCATTTAGTCGGGATTA411340.13341836075236227No Hit
GGAGTTGAAATCTGGATAATTTTGCTGAT406120.13172525081137104No Hit
CGGTCGCTGGTTCAAGTTCAAC405730.13159875409164182No Hit
CATGTGGCAAAAAACCTACAAGACCTGCTAGCGTGAT399910.12971103381260563No Hit
CATGAACACCGACACGTTGAACGCATATTGCACATCG397100.12879960872942836No Hit
CAGTCGGGCGCGTGATGGATTCCCCCGGACACCGG394320.12789791416315333No Hit
GCTTAAATGCGCATTTAGTCGGGATTATGGATT391780.1270740637320963No Hit
CATAAGGCTCAGTATAACAGCTATAATTTACAAGATC388070.12587072314185158No Hit
GAGGACACTGCGATCCATTACGAAACAGC386820.12546528493759124No Hit
CTCTAAGGTCGTAACCAAACCGAGCTGATAGTGT382930.124203561245933No Hit
GGAGTTGAAATCTGGATAATTTTGCTGA379540.12310401283597895No Hit
TGGAGTTGAAATCTGGATAATTTTGCTGATCGT376190.12201743844856121No Hit
ATTTCGATCCTCTCAGACTACCCTTGCT365180.11844633874543602No Hit
TTTCGATCCTCTCAGACTACCCTTGCT361370.11721056309885049No Hit
GCTGGAGTTGAAATCTGGATAATTTTGCTGA350120.1135616192605073No Hit
AAGTTCAACTAGAATGTGGCT328460.10653618605708395No Hit
GGTCGCTGGTTCAAGTTCAACTAGAATGTGGCT315370.10229043718206957No Hit
CCGGTCGCTGGTTCAAGTTCAAC308810.10016269748611123No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)