FastQCFastQC Report
Thu 22 Jun 2023
ERR2201445_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2201445_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7925554
Total Bases229.1 Mbp
Sequences flagged as poor quality0
Sequence length1-76
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1210841.527767017927075No Hit
AAGTCCTTCTGATCGAGGCC788910.9954004477163363No Hit
AGATCAGACGTGGCGACCCGCTGAA694010.8756611840635999No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC570560.7198992019990023No Hit
ACGCCTGTCTGAGCGTCGCT417340.5265751769529297No Hit
GGGGCTACGCCTGTCTGAGCGTCGCT398610.5029427595850082No Hit
AAGTCCTTCTGATCGAGGC279590.3527702921461389No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT243950.30780182685021135No Hit
AGATCAGACGTGGCGACCCGCTGAAT233800.2949951511276057No Hit
AGGAGTGGAGCCTGCGGCTTAATTTG228520.2883331562689498No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATTTG225630.2846867234769961No Hit
ATCGTGACGGTCGTGCGACCATTCGT209690.26457456475597796No Hit
AGCGGAGGAAAAGAAACTAACCAGGATTCCCT205230.2589471978867345No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT201780.25459418988249904No Hit
CGGGGCTACGCCTGTCTGAGCGTCGCT198520.25048091275385925No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCT194160.2449797200296661No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT193450.24408388359980893No Hit
AGTGCGGTAACGCGACCGATCCCGGAGA192180.24248147195767006No Hit
AGATCAGACGTGGCGACCCGCTGA185540.23410350872633004No Hit
AGCCGATCGAAAGGGAGTCGGGTT181620.2291574822403582No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC178180.22481709165062783No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT174160.21974489101960568No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCC170920.2156568487199759No Hit
AGCGGTGGATCACTCGGCTCGTGCGT169240.21353712308313086No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGG168010.21198518109901213No Hit
AAGAGGGCGTGAAACCGTTAAGAGG165740.20912102800637028No Hit
CGCGGCGCGGGAAATGTGGCGTACGGAAG165160.2083892179650785No Hit
TAAGTCAGAATCCCGCCCAGGCGGAACGATAC163160.2058657350640725No Hit
CGGGTGTTGACGCGATGTGATTTCTGCCCA160830.20292587748440044No Hit
AGTGCGGTAACGCGACCGATCCCGGA160140.20205527588355335No Hit
CTCCCGGGGCTACGCCTGTCTGAGC155930.19674334437693566No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT155130.19573395121653325No Hit
CGCGGCGCGGGAAATGTGGCGTACGGAA152820.19281932846587127No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC152660.19261744983379078No Hit
AGAATCCCGCCCAGGCGGAACGATAC151030.1905608112694709No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCT150250.18957665293807852No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAC144720.18259922271679682No Hit
AGGTGTCCTAAGGCGAGCTCAGGGAGGACA144270.18203143906407046No Hit
AGTTTTATCCGGTAAAGCGAATGAT141630.1787004416347425No Hit
AAGGTAGCCAAATGCCTCGTCATCT138620.17490259986872841No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCC133030.16784946516041654No Hit
AGCCGATCGAAAGGGAGTCGGGTTC131290.16565403503654128No Hit
AGGAGTGGAGCCTGCGGCTTAATT129400.1632693436950906No Hit
ACGAGCGTACGCGTTAGGACCCGAAAGATGG127590.16098559166968013No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG126970.16020331197036827No Hit
ACGCGTTAGGACCCGAAAGATGGT124670.1573013066342113No Hit
ATGTACACGGAGTCGACCCGCAACGCGA122950.15513111133934612No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG122720.15484091080573043No Hit
AGCGGTGGATCACTCGGCTCGTGCGTC121830.15371796091478274No Hit
TGCCCTCAGCCGATCGAAAGGGAGTCGGGT119650.15096736455268617No Hit
CACGGGGTCGGCGGCGATGTCGGCTACCCACCCG117870.1487214647707908No Hit
AGTTTTATCCGGTAAAGCGAATGATT117070.14771207161038835No Hit
CGCCGCGGCGCGGGAAATGTGGCGTACGGAAG111470.14064631948757148No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTG110890.13991450944627973No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC110240.13909437750345277No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATT104920.13238191298677668No Hit
CAGCGGAGGAAAAGAAACTAACCAGGATTCCCT103020.12998460423082095No Hit
AAACGATGCCGACTGGCGATGCGGCGGCG101290.12780179152145074No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATA97940.12357495766226563No Hit
CGCCGCGGCGCGGGAAATGTGGCGTACGGAAGACC97780.12337307903018514No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCC96380.12160664099948092No Hit
AGCTGGTTCCCTCCGAAGTTTCCCT94070.11869201824881895No Hit
ACGAGCGTACGCGTTAGGACCCGAAAGATGGT91050.11488155906829983No Hit
CGCCGCGGCGCGGGAAATGTGGCGTACGGAA89710.11319082552462578No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATAC88330.11144962232293162No Hit
CTAAGTCAGAATCCCGCCCAGGCGGAACGATAC88130.111197274032831No Hit
CCGGGGCTACGCCTGTCTGAGCGTCGCT87500.11040237691901413No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGA87330.1101878808724286No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG86960.10972103653574249No Hit
CCATTCGTGATGGGGATCGGGGATT86670.10935513151509663No Hit
ACGGAGTCGAGCTCAACCCGCAACGCGA85840.10830788611117911No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT85370.1077148676294427No Hit
AGCGGTGGATCACTCGGCTCGTGCG85080.10734896260879681No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCT84300.10636480427740447No Hit
GCACGAGCGTACGCGTTAGGACCCGAAAGATGGT82700.10434601795659963No Hit
AAGGTAGCCAAATGCCTCGTCATCTA81800.10321045065114691No Hit
AAGAGGGCGTGAAACCGTTAAGAGGT80640.1017468305685634No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG80430.10148186486395779No Hit
ATTCGTGATGGGGATCGGGGATTG80050.10100240311276662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)